RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CENPMQ9NSP4 180 aa11.97□□□□□ -0.49
ATG4B-218ENST00000479554 DNAJC27Q9NZQ0 273 aa11.97□□□□□ -0.49
ATG4B-218ENST00000479554 CLN8Q9UBY8 286 aa11.97□□□□□ -0.49
ATG4B-218ENST00000479554 IGHV3OR16-10A0A075B7F0 116 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 RIIAD1A6NNX1 92 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 ZNF593O00488 134 aaPredicted RBP11.96□□□□□ -0.49
ATG4B-218ENST00000479554 PHYHO14832 338 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 IGHV4-38-2P0DP08 117 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 SLC2A1P11166 492 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 ZNF3P17036 446 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 PRTN3P24158 256 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 SLC15A1P46059 708 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 BAMBIQ13145 260 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 MPPED2Q15777 294 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 BCL6BQ8N143 479 aaPredicted RBP11.96□□□□□ -0.49
ATG4B-218ENST00000479554 STX19Q8N4C7 294 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 ZNF511Q8NB15 262 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 C19orf18Q8NEA5 215 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 MUL1Q969V5 352 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 TMIGD2Q96BF3 282 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 UPRTQ96BW1 309 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 DUX5Q96PT3 197 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 KCNJ15Q99712 375 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 NMNAT2Q9BZQ4 307 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 RBM38Q9H0Z9 239 aaKnown RBP11.96□□□□□ -0.49
ATG4B-218ENST00000479554 OPA3Q9H6K4 179 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 AMBNQ9NP70 447 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 MRPL15Q9P015 296 aaKnown RBP11.96□□□□□ -0.49
ATG4B-218ENST00000479554 RNF7Q9UBF6 113 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 N6AMT1Q9Y5N5 214 aa11.96□□□□□ -0.49
ATG4B-218ENST00000479554 TRAV40A0A0B4J280 105 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 IRGMA1A4Y4 181 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 C5orf63A6NC05 138 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 PRODHO43272 600 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 XRCC2O43543 280 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 CLUP10909 449 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 ANOS1P23352 680 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 BLVRAP53004 296 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 GRB2P62993 217 aaKnown RBP11.95□□□□□ -0.5
ATG4B-218ENST00000479554 EMX1Q04741 257 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-218ENST00000479554 ST3GAL4Q11206 333 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 KCNJ8Q15842 424 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 PCK2Q16822 640 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 TEX30Q5JUR7 227 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 WDR25Q64LD2 544 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-218ENST00000479554 LYPD2Q6UXB3 125 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 SPATC1Q76KD6 591 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 BOLLQ8N9W6 283 aaKnown RBP11.95□□□□□ -0.5
ATG4B-218ENST00000479554 PLPP7Q8NBV4 271 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 OR56B2PQ8NGI1 322 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 FCGR1BQ92637 280 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 RORBQ92753 470 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 RFKQ969G6 155 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 DACT3Q96B18 629 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-218ENST00000479554 ZNF48Q96MX3 618 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-218ENST00000479554 TECTBQ96PL2 329 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 NUDT16L1Q9BRJ7 211 aaKnown RBP11.95□□□□□ -0.5
ATG4B-218ENST00000479554 CMC2Q9NRP2 79 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 CEPT1Q9Y6K0 416 aa11.95□□□□□ -0.5
ATG4B-218ENST00000479554 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-218ENST00000479554 KIR2DS1A0A191URI9 304 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 CCDC160A6NGH7 325 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 C3orf80F5H4A9 247 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 LGALS8O00214 317 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 TBX1O43435 398 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 PTBP3O95758 552 aaKnown RBP11.94□□□□□ -0.5
ATG4B-218ENST00000479554 FADS2O95864 444 aaKnown RBP11.94□□□□□ -0.5
ATG4B-218ENST00000479554 HKR1P10072 659 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 HSD11B1P28845 292 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 PSMB10P40306 273 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 MTNR1AP48039 350 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 CX3CR1P49238 355 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 NPY4RP50391 375 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 HOXA4Q00056 320 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-218ENST00000479554 ZNF91Q05481 1191 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 MZT1Q08AG7 82 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 FOXL1Q12952 345 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 EIF2B1Q14232 305 aaKnown RBP11.94□□□□□ -0.5
ATG4B-218ENST00000479554 TBCEQ15813 527 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-218ENST00000479554 KLHL22Q53GT1 634 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 C9orf139Q6ZV77 190 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 GID4Q8IVV7 300 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 SPERTQ8NA61 448 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 OR13F1Q8NGS4 319 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 C1orf147Q96MC9 270 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-218ENST00000479554 INTS14Q96SY0 518 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 CDCA4Q9BXL8 241 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 ACOT13Q9NPJ3 140 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 TRIM36Q9NQ86 728 aa11.94□□□□□ -0.5
ATG4B-218ENST00000479554 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.94□□□□□ -0.5
ATG4B-218ENST00000479554 hCG_1807616A0A1W2PRN6 198 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 A6NLC8 198 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 ANKRD30BLA7E2S9 258 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 ZNF701M0R085 212 aaPredicted RBP11.93□□□□□ -0.5
ATG4B-218ENST00000479554 ENSAO43768 121 aaKnown RBP11.93□□□□□ -0.5
ATG4B-218ENST00000479554 PLATP00750 562 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 ANXA2P07355 339 aaKnown RBP11.93□□□□□ -0.5
ATG4B-218ENST00000479554 GRPP07492 148 aa11.93□□□□□ -0.5
ATG4B-218ENST00000479554 DBTP11182 482 aaKnown RBP11.93□□□□□ -0.5
ATG4B-218ENST00000479554 MAP2K4P45985 399 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms