RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 RTL8AQ9BWD3 113 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 PAPOLGQ9BWT3 736 aaKnown RBP13□□□□□ -0.33
C9orf3-217ENST00000479161 PATZ1Q9HBE1 687 aaKnown RBP13□□□□□ -0.33
C9orf3-217ENST00000479161 TMEM165Q9HC07 324 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 YAE1D1Q9NRH1 226 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 TREM2Q9NZC2 230 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 NKX1-2Q9UD57 310 aaPredicted RBP13□□□□□ -0.33
C9orf3-217ENST00000479161 ENPP5Q9UJA9 477 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 CDC42EP3Q9UKI2 254 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 KCNS2Q9ULS6 477 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 SLC22A13Q9Y226 551 aa13□□□□□ -0.33
C9orf3-217ENST00000479161 OR5B21A6NL26 309 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 MAGEB4O15481 346 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-217ENST00000479161 APOL3O95236 402 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 UBCP0CG48 685 aaKnown RBP12.99□□□□□ -0.33
C9orf3-217ENST00000479161 HOXB4P17483 251 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-217ENST00000479161 ZNF154Q13106 437 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 PRDX4Q13162 271 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 MPPED2Q15777 294 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 C11orf91Q3C1V1 193 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 ZNF404Q494X3 552 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 TMEM244Q5VVB8 128 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 Q71RC1 249 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-217ENST00000479161 C11orf53Q8IXP5 236 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 ZDHHC23Q8IYP9 409 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 OR1M1Q8NGA1 313 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 OR10Z1Q8NGY1 313 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 OR14K1Q8NGZ2 314 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 OR2G2Q8NGZ5 317 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 ZNF420Q8TAQ5 688 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-217ENST00000479161 CYGBQ8WWM9 190 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 HIST1H2AAQ96QV6 131 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 VCX3BQ9H321 246 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 PLCXD1Q9NUJ7 323 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 ERVK13-1Q9NX77 482 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 DCAF16Q9NXF7 216 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 AASSQ9UDR5 926 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 MIOXQ9UGB7 285 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 GNG8Q9UK08 70 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 PPIAL4AQ9Y536 164 aa12.99□□□□□ -0.33
C9orf3-217ENST00000479161 A8MXK9 166 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 INAFM1C9JVW0 142 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 ZNF16P17020 682 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-217ENST00000479161 GNG3P63215 75 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 CSNK2BP67870 215 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 THAP5Q7Z6K1 395 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 GLCCI1Q86VQ1 547 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 C8orf59Q8N0T1 100 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-217ENST00000479161 OR52I1Q8NGK6 324 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 PPP1R14AQ96A00 147 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 TMEM186Q96B77 213 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 POM121Q96HA1 1249 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 TECTBQ96PL2 329 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 ALG8Q9BVK2 526 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 TTTY10Q9BZA0 68 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 ACOXLQ9NUZ1 547 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 CNOT2Q9NZN8 540 aaKnown RBP12.98□□□□□ -0.33
C9orf3-217ENST00000479161 MYRFQ9Y2G1 1151 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 LRCH1Q9Y2L9 728 aa12.98□□□□□ -0.33
C9orf3-217ENST00000479161 SVEP1Q4LDE5 3571 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 MXRA5Q9NR99 2828 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 TRAV38-1A0A0B4J264 116 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 ZNF850A8MQ14 1090 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 FAM157AC9JC47 383 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 LGALS8O00214 317 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 FOXH1O75593 365 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 RPP14O95059 124 aaKnown RBP12.97□□□□□ -0.33
C9orf3-217ENST00000479161 CYB5R3P00387 301 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-217ENST00000479161 WNT2P09544 360 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 PIPP12273 146 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-217ENST00000479161 THBS2P35442 1172 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 TGM4P49221 684 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 OR12D2P58182 307 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 TP53I3Q53FA7 332 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 WDR38Q5JTN6 314 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 CLVS2Q5SYC1 327 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 PRAMEF6Q5VXH4 476 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 TEX36Q5VZQ5 186 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 DCDC5Q6ZRR9 648 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 WDR86Q86TI4 376 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 COMMD2Q86X83 199 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 PRSS35Q8N3Z0 413 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 TEX29Q8N6K0 151 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 HPSE2Q8WWQ2 592 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 PIGCQ92535 297 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 C12orf43Q96C57 262 aaKnown RBP12.97□□□□□ -0.33
C9orf3-217ENST00000479161 PELI1Q96FA3 418 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 FAM71F1Q96KD3 344 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-217ENST00000479161 AMBNQ9NP70 447 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 FRRS1LQ9P0K9 344 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 PCDHB10Q9UN67 800 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 DIMT1Q9UNQ2 313 aaKnown RBP12.97□□□□□ -0.33
C9orf3-217ENST00000479161 PIGLQ9Y2B2 252 aa12.97□□□□□ -0.33
C9orf3-217ENST00000479161 CAB39Q9Y376 341 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-217ENST00000479161 A0A1B0GVI7 797 aa12.96□□□□□ -0.33
C9orf3-217ENST00000479161 ISPDA4D126 451 aa12.96□□□□□ -0.33
C9orf3-217ENST00000479161 CEACAM18A8MTB9 384 aa12.96□□□□□ -0.33
C9orf3-217ENST00000479161 J3QLI3 93 aa12.96□□□□□ -0.33
C9orf3-217ENST00000479161 TNFRSF13BO14836 293 aaPredicted RBP12.96□□□□□ -0.33
C9orf3-217ENST00000479161 SYT7O43581 403 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms