RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 DMRTB1Q96MA1 342 aa19.45■□□□□ 0.7
C9orf3-215ENST00000478473 RTL8AQ9BWD3 113 aa19.45■□□□□ 0.7
C9orf3-215ENST00000478473 FGF23Q9GZV9 251 aaPredicted RBP19.45■□□□□ 0.7
C9orf3-215ENST00000478473 OAZ3Q9UMX2 235 aa19.45■□□□□ 0.7
C9orf3-215ENST00000478473 hCG_1807616A0A1W2PRN6 198 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 CIB2O75838 187 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 MAP2K3P46734 347 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 RIDAP52758 137 aaKnown RBP19.44■□□□□ 0.7
C9orf3-215ENST00000478473 BPIFB3P59826 476 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 ACTR3P61158 418 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 ZNF829Q3KNS6 432 aaPredicted RBP19.44■□□□□ 0.7
C9orf3-215ENST00000478473 ATPAF1Q5TC12 328 aaPredicted RBP19.44■□□□□ 0.7
C9orf3-215ENST00000478473 LRRC29Q8WV35 223 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 C22orf15Q8WYQ4 148 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 PKP2Q99959 881 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 PBOV1Q9GZY1 135 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 PRDM13Q9H4Q3 707 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 SMURF1Q9HCE7 757 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 CLN6Q9NWW5 311 aa19.44■□□□□ 0.7
C9orf3-215ENST00000478473 H2AFY2Q9P0M6 372 aaPredicted RBP19.44■□□□□ 0.7
C9orf3-215ENST00000478473 TENM1Q9UKZ4 2725 aa19.43■□□□□ 0.7
C9orf3-215ENST00000478473 ZNF816-ZNF321PA0A0X1KG74 233 aa19.43■□□□□ 0.7
C9orf3-215ENST00000478473 ZNF850A8MQ14 1090 aa19.43■□□□□ 0.7
C9orf3-215ENST00000478473 M0R129 80 aa19.43■□□□□ 0.7
C9orf3-215ENST00000478473 CDIPTO14735 213 aa19.43■□□□□ 0.7
C9orf3-215ENST00000478473 ECDO95905 644 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-215ENST00000478473 IGHV4-38-2P0DP08 117 aa19.43■□□□□ 0.7
C9orf3-215ENST00000478473 UBA52P62987 128 aaKnown RBP19.43■□□□□ 0.7
C9orf3-215ENST00000478473 EGR3Q06889 387 aa19.43■□□□□ 0.7
C9orf3-215ENST00000478473 MICBQ29980 383 aa19.43■□□□□ 0.7
C9orf3-215ENST00000478473 ZNF322Q6U7Q0 402 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-215ENST00000478473 ZDHHC23Q8IYP9 409 aa19.43■□□□□ 0.7
C9orf3-215ENST00000478473 BOLLQ8N9W6 283 aaKnown RBP19.43■□□□□ 0.7
C9orf3-215ENST00000478473 ZNF48Q96MX3 618 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-215ENST00000478473 DNTTIP1Q9H147 329 aa19.43■□□□□ 0.7
C9orf3-215ENST00000478473 MOB1AQ9H8S9 216 aa19.43■□□□□ 0.7
C9orf3-215ENST00000478473 ZMAT3Q9HA38 289 aaKnown RBP19.43■□□□□ 0.7
C9orf3-215ENST00000478473 WARS2Q9UGM6 360 aaKnown RBP19.43■□□□□ 0.7
C9orf3-215ENST00000478473 CLDN34H7C241 214 aa19.42■□□□□ 0.7
C9orf3-215ENST00000478473 PSMD9O00233 223 aa19.42■□□□□ 0.7
C9orf3-215ENST00000478473 RGS9O75916 674 aaPredicted RBP19.42■□□□□ 0.7
C9orf3-215ENST00000478473 GYPAP02724 150 aa19.42■□□□□ 0.7
C9orf3-215ENST00000478473 MMP9P14780 707 aa19.42■□□□□ 0.7
C9orf3-215ENST00000478473 POLR2IP36954 125 aaKnown RBP19.42■□□□□ 0.7
C9orf3-215ENST00000478473 TMED1Q13445 227 aa19.42■□□□□ 0.7
C9orf3-215ENST00000478473 SLC35F2Q8IXU6 374 aa19.42■□□□□ 0.7
C9orf3-215ENST00000478473 BCL6BQ8N143 479 aaPredicted RBP19.42■□□□□ 0.7
C9orf3-215ENST00000478473 SIGLECL1Q8N7X8 197 aa19.42■□□□□ 0.7
C9orf3-215ENST00000478473 OR8J1Q8NGP2 316 aa19.42■□□□□ 0.7
C9orf3-215ENST00000478473 PIGCQ92535 297 aa19.42■□□□□ 0.7
C9orf3-215ENST00000478473 IL4I1Q96RQ9 567 aa19.42■□□□□ 0.7
C9orf3-215ENST00000478473 RBM4BQ9BQ04 359 aaKnown RBP19.42■□□□□ 0.7
C9orf3-215ENST00000478473 E9PQ18 207 aa19.41■□□□□ 0.7
C9orf3-215ENST00000478473 TTRP02766 147 aa19.41■□□□□ 0.7
C9orf3-215ENST00000478473 AMY2BP19961 511 aa19.41■□□□□ 0.7
C9orf3-215ENST00000478473 TGM4P49221 684 aa19.41■□□□□ 0.7
C9orf3-215ENST00000478473 CXCR4P61073 352 aa19.41■□□□□ 0.7
C9orf3-215ENST00000478473 RBMS3Q6XE24 437 aaKnown RBP19.41■□□□□ 0.7
C9orf3-215ENST00000478473 SCCPDHQ8NBX0 429 aa19.41■□□□□ 0.7
C9orf3-215ENST00000478473 RNF170Q96K19 258 aa19.41■□□□□ 0.7
C9orf3-215ENST00000478473 C1orf147Q96MC9 270 aaPredicted RBP19.41■□□□□ 0.7
C9orf3-215ENST00000478473 TECTBQ96PL2 329 aa19.41■□□□□ 0.7
C9orf3-215ENST00000478473 SEMA6AQ9H2E6 1030 aa19.41■□□□□ 0.7
C9orf3-215ENST00000478473 GPR84Q9NQS5 396 aa19.41■□□□□ 0.7
C9orf3-215ENST00000478473 ZNF879B4DU55 563 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 H3BNX3 289 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 DVL1O14640 695 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 GPR37O15354 613 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 PRTN3P24158 256 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 HTR1FP30939 366 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 FGF12P61328 243 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 GNG3P63215 75 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 RIPPLY1Q0D2K3 151 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 POU4F2Q12837 409 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 CEACAM21Q3KPI0 293 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 ZNF684Q5T5D7 378 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 STUMQ69YW2 141 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 ELMOD2Q8IZ81 293 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 PNLDC1Q8NA58 520 aaKnown RBP19.4■□□□□ 0.7
C9orf3-215ENST00000478473 OR5A2Q8NGI9 324 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 OR51E1Q8TCB6 317 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 RAB3IPQ96QF0 476 aaPredicted RBP19.4■□□□□ 0.7
C9orf3-215ENST00000478473 MS4A7Q9GZW8 240 aaPredicted RBP19.4■□□□□ 0.7
C9orf3-215ENST00000478473 OR51I2Q9H344 312 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 USE1Q9NZ43 259 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 MRM2Q9UI43 246 aaKnown RBP19.4■□□□□ 0.7
C9orf3-215ENST00000478473 IKZF2Q9UKS7 526 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 R4GMQ9 66 aa19.4■□□□□ 0.7
C9orf3-215ENST00000478473 IGHV3OR15-7A0A075B7D8 119 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 TRAV40A0A0B4J280 105 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 OR5B21A6NL26 309 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 DHRS7CA6NNS2 312 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 P2RY10O00398 339 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 TMPRSS2O15393 492 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 DHRS3O75911 302 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 ALPLP05186 524 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 MTNR1AP48039 350 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 MFGE8Q08431 387 aaPredicted RBP19.39■□□□□ 0.69
C9orf3-215ENST00000478473 WDR38Q5JTN6 314 aa19.39■□□□□ 0.69
C9orf3-215ENST00000478473 TMEM42Q69YG0 159 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms