RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 THEM6Q8WUY1 208 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 DNAJC9Q8WXX5 260 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 ITPKCQ96DU7 683 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 CCL13Q99616 98 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 NIPSNAP1Q9BPW8 284 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 CHID1Q9BWS9 393 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 PRRG3Q9BZD7 231 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 VNN3Q9NY84 501 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 C1RLQ9NZP8 487 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 C5orf63A6NC05 138 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 AQP12BA6NM10 295 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 PAHP00439 452 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 CST4P01036 141 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 ANXA8P13928 327 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 CSNK2BP67870 215 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 PRDX4Q13162 271 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 OCLNQ16625 522 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 KLHL12Q53G59 568 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 ATPAF1Q5TC12 328 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 LCN1P1Q5VSP4 162 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 NCR3LG1Q68D85 454 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 PLBD1Q6P4A8 553 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 KCTD18Q6PI47 426 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 PRSS45Q7RTY3 260 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 VMO1Q7Z5L0 202 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 KRT77Q7Z794 578 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 AQP12AQ8IXF9 295 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 ZDHHC23Q8IYP9 409 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 IQCF1Q8N6M8 205 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 C1orf21Q9H246 121 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 RASSF4Q9H2L5 321 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 MED20Q9H944 212 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 HAO2Q9NYQ3 351 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 PDP1Q9P0J1 537 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 LAMP5Q9UJQ1 280 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 RHBDD3Q9Y3P4 386 aa11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 SOX21Q9Y651 276 aaPredicted RBP11.93□□□□□ -0.5
SMARCE1-209ENST00000478349 ACOD1A6NK06 481 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 GPR137BO60478 399 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 FAM107AO95990 144 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 OSMP13725 252 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 ATP6V1B1P15313 513 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 MAP2K3P46734 347 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 GYS2P54840 703 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 IKZF1Q13422 519 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 GINS1Q14691 196 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 STUMQ69YW2 141 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 DEGS2Q6QHC5 323 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 WDR86Q86TI4 376 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 COMMD2Q86X83 199 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 FAM216BQ8N7L0 139 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 LY6G5BQ8NDX9 201 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 H1FXQ92522 213 aaKnown RBP11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 CCT8L2Q96SF2 557 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 PKP2Q99959 881 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 DCTN5Q9BTE1 182 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 TMEM14AQ9Y6G1 99 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 MEGF8Q7Z7M0 2845 aa11.92□□□□□ -0.5
SMARCE1-209ENST00000478349 A0A0U1RQK1 487 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 ZNF816-ZNF321PA0A0X1KG74 233 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 A0A1W2PPH5 198 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 A0A1W2PQ09 198 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 ZNF850A8MQ14 1090 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 M0R1W7 72 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 ACOT8O14734 319 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 ANOS1P23352 680 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 IER3P46695 156 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 ZNF829Q3KNS6 432 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 DHRS7BQ6IAN0 325 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 C1orf122Q6ZSJ8 110 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 THAP5Q7Z6K1 395 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 C11orf53Q8IXP5 236 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 OR5R1Q8NH85 324 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 C8orf46Q8TAG6 207 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 ASB17Q8WXJ9 295 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 OR5P3Q8WZ94 311 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 UBE2FQ969M7 185 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 RNF170Q96K19 258 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 RAB3IPQ96QF0 476 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 MROQ9BYG7 248 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 YIPF3Q9GZM5 350 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 METTL8Q9H825 291 aaKnown RBP11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 SLC25A10Q9UBX3 287 aaPredicted RBP11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 RNF114Q9Y508 228 aa11.91□□□□□ -0.5
SMARCE1-209ENST00000478349 TRBV23-1A0A0A0MS06 115 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 A0A0U1RQV5 110 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 OR5B21A6NL26 309 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 SELENOFO60613 162 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 ZNF254O75437 659 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 TGM4P49221 684 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 CAV3P56539 151 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 GNG3P63215 75 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 MS4A2Q01362 244 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 ACSM1Q08AH1 577 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 POU4F2Q12837 409 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 DNAL1Q4LDG9 190 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 CPOQ8IVL8 374 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 ADGRG5Q8IZF4 528 aa11.9□□□□□ -0.5
SMARCE1-209ENST00000478349 ZNF671Q8TAW3 534 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms