RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 EGR1P18146 543 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 PEX2P28328 305 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 ZNF91Q05481 1191 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 GABPB1Q06547 395 aaPredicted RBP13.03□□□□□ -0.32
HMGA1-206ENST00000478214 RIPPLY1Q0D2K3 151 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 TP53I3Q53FA7 332 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 ESCO2Q56NI9 601 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 DCAF12L2Q5VW00 463 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 C1orf229Q6ZS94 237 aaPredicted RBP13.03□□□□□ -0.32
HMGA1-206ENST00000478214 KRT74Q7RTS7 529 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 THAP5Q7Z6K1 395 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 CATSPERDQ86XM0 798 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 ZDHHC23Q8IYP9 409 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 OR4M2Q8NGB6 313 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 RORBQ92753 470 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 LGALS12Q96DT0 336 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 RNF170Q96K19 258 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 RDH12Q96NR8 316 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 TMPRSS13Q9BYE2 586 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 AMBNQ9NP70 447 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 ABCB9Q9NP78 766 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 MMP26Q9NRE1 261 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 GNG8Q9UK08 70 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 PIGLQ9Y2B2 252 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 EXOGQ9Y2C4 368 aaKnown RBP13.03□□□□□ -0.32
HMGA1-206ENST00000478214 ARHGAP32A7KAX9 2087 aa13.03□□□□□ -0.32
HMGA1-206ENST00000478214 SNTNA6NMZ2 147 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 A8MXK9 166 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 TRAPPC2LH3BP13 241 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 CDIPTO14735 213 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 MPZL2O60487 215 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 DHRS3O75911 302 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 PSMB10P40306 273 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 ISL1P61371 349 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 ACTC1P68032 377 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 ACTA1P68133 377 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 ODF4Q2M2E3 257 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 DMRTC1Q5HYR2 192 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 CEP78Q5JTW2 689 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 WDR82Q6UXN9 313 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 DCDC5Q6ZRR9 648 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 KCTD8Q6ZWB6 473 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 ZNF555Q8NEP9 628 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 OR14K1Q8NGZ2 314 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 LRRC29Q8WV35 223 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 APH1BQ8WW43 257 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 ITFG2Q969R8 447 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 NEIL1Q96FI4 390 aaPredicted RBP13.02□□□□□ -0.33
HMGA1-206ENST00000478214 Q96MT0 163 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 HIST1H2AAQ96QV6 131 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 TLNRD1Q9H1K6 362 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 RNPEPL1Q9HAU8 725 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 ACOXLQ9NUZ1 547 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 LRCH1Q9Y2L9 728 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 POLR3KQ9Y2Y1 108 aaPredicted RBP13.02□□□□□ -0.33
HMGA1-206ENST00000478214 WNK2Q9Y3S1 2297 aa13.02□□□□□ -0.33
HMGA1-206ENST00000478214 LOC105371242A0A075B767 164 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 IGHV3OR15-7A0A075B7D8 119 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 PPIAL4CA0A0B4J2A2 164 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 DAPL1A0PJW8 107 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 OOEPA6NGQ2 149 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 H3BSH0 61 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 J3QLI3 93 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 MTRF1O75570 445 aaKnown RBP13.01□□□□□ -0.33
HMGA1-206ENST00000478214 DBTP11182 482 aaKnown RBP13.01□□□□□ -0.33
HMGA1-206ENST00000478214 GATA3P23771 443 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 CPT2P23786 658 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 PITPNBP48739 271 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 GPM6AP51674 278 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 CDONQ4KMG0 1287 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 WDR38Q5JTN6 314 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 ZBTB37Q5TC79 503 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 MOB3CQ70IA8 216 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 FAM220AQ7Z4H9 259 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 PRSS35Q8N3Z0 413 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 ACBD7Q8N6N7 88 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 OR8B3Q8NGG8 313 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 RPL3LQ92901 407 aaKnown RBP13.01□□□□□ -0.33
HMGA1-206ENST00000478214 RNF166Q96A37 237 aaPredicted RBP13.01□□□□□ -0.33
HMGA1-206ENST00000478214 OR8B2Q96RD0 313 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 SSBP3Q9BWW4 388 aaPredicted RBP13.01□□□□□ -0.33
HMGA1-206ENST00000478214 ENPP5Q9UJA9 477 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 PCDHGB1Q9Y5G3 927 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 V9GYS6 101 aa13.01□□□□□ -0.33
HMGA1-206ENST00000478214 FBN1P35555 2871 aaKnown RBP13□□□□□ -0.33
HMGA1-206ENST00000478214 TRAV38-1A0A0B4J264 116 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 A6NIN4 97 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 TMEM210A6NLX4 147 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 ZNF732B4DXR9 585 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 TNFRSF13BO14836 293 aaPredicted RBP13□□□□□ -0.33
HMGA1-206ENST00000478214 CLIC3O95833 236 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 GYPAP02724 150 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 ADRA2CP18825 462 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 CCL1P22362 96 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 OR12D2P58182 307 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 GNB2P62879 340 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 KCNJ8Q15842 424 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 CEACAM21Q3KPI0 293 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 FAM76BQ5HYJ3 339 aa13□□□□□ -0.33
HMGA1-206ENST00000478214 PLCXD3Q63HM9 321 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms