RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-211ENST00000477612 TRIM77I1YAP6 450 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 ADAM20O43506 726 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 PLATP00750 562 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 LIPFP07098 398 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 CXCR4P61073 352 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 CSNK2BP67870 215 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 ZNF829Q3KNS6 432 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-211ENST00000477612 ZBTB37Q5TC79 503 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 ZNF322Q6U7Q0 402 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-211ENST00000477612 C9orf139Q6ZV77 190 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 ZDHHC22Q8N966 263 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 HPSE2Q8WWQ2 592 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 PYDC1Q8WXC3 89 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 PIGCQ92535 297 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 C12orf43Q96C57 262 aaKnown RBP18.07■□□□□ 0.48
COL9A3-211ENST00000477612 PKP2Q99959 881 aa18.07■□□□□ 0.48
COL9A3-211ENST00000477612 FGF23Q9GZV9 251 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-211ENST00000477612 WARS2Q9UGM6 360 aaKnown RBP18.07■□□□□ 0.48
COL9A3-211ENST00000477612 ZNF816-ZNF321PA0A0X1KG74 233 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 C22orf46C9J442 243 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 H3BNX3 289 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 CDIPTO14735 213 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 ENSAO43768 121 aaKnown RBP18.06■□□□□ 0.48
COL9A3-211ENST00000477612 FCN3O75636 299 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 RGS9O75916 674 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-211ENST00000477612 GYPAP02724 150 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 HTR1FP30939 366 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 EGR3Q06889 387 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 TMED1Q13445 227 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 MICBQ29980 383 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 ZFP1Q6P2D0 407 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 CCDC121Q6ZUS5 278 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 DOK3Q7L591 496 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 ZDHHC23Q8IYP9 409 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 OR8J1Q8NGP2 316 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 C22orf15Q8WYQ4 148 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 SMURF1Q9HCE7 757 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 ESM1Q9NQ30 184 aa18.06■□□□□ 0.48
COL9A3-211ENST00000477612 E9PQ18 207 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 ZNF670-ZNF695F2Z2N8 137 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 TTRP02766 147 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 POU4F2Q12837 409 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 ATPAF1Q5TC12 328 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-211ENST00000477612 Q6ZSR3 168 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 PPP1R14AQ96A00 147 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 RNF170Q96K19 258 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 TECTBQ96PL2 329 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 APOL4Q9BPW4 351 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 MOB1AQ9H8S9 216 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 USE1Q9NZ43 259 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 IKZF2Q9UKS7 526 aa18.05■□□□□ 0.48
COL9A3-211ENST00000477612 SAC3D1A6NKF1 404 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 ECDO95905 644 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-211ENST00000477612 ALPLP05186 524 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 IGHV4-38-2P0DP08 117 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 MFGE8Q08431 387 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-211ENST00000477612 RIPPLY1Q0D2K3 151 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 KPNB1Q14974 876 aaKnown RBP18.04■□□□□ 0.48
COL9A3-211ENST00000477612 CEACAM21Q3KPI0 293 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 ELMOD2Q8IZ81 293 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 BCL6BQ8N143 479 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-211ENST00000477612 SCCPDHQ8NBX0 429 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 OR51G2Q8NGK0 314 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 OR51E1Q8TCB6 317 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 TRUB1Q8WWH5 349 aaKnown RBP18.04■□□□□ 0.48
COL9A3-211ENST00000477612 TTTY10Q9BZA0 68 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 RIBC2Q9H4K1 309 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 GPR84Q9NQS5 396 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 MRM2Q9UI43 246 aaKnown RBP18.04■□□□□ 0.48
COL9A3-211ENST00000477612 R4GMQ9 66 aa18.04■□□□□ 0.48
COL9A3-211ENST00000477612 IGHV3OR15-7A0A075B7D8 119 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 TMEM89A2RUT3 159 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 DVL1O14640 695 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 DHRS3O75911 302 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 OR2T7P0C7T2 308 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 AMY2BP19961 511 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 COMPP49747 757 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-211ENST00000477612 BPIFB3P59826 476 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 OR5A2Q8NGI9 324 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 OR2T27Q8NH04 317 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 FAM81AQ8TBF8 368 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 RPL3LQ92901 407 aaKnown RBP18.03■□□□□ 0.48
COL9A3-211ENST00000477612 EME1Q96AY2 570 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 HRASLS5Q96KN8 279 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 DMRTB1Q96MA1 342 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 ZNF48Q96MX3 618 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-211ENST00000477612 HIST1H2AAQ96QV6 131 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 DNTTIP1Q9H147 329 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 RASSF4Q9H2L5 321 aa18.03■□□□□ 0.48
COL9A3-211ENST00000477612 ZNF879B4DU55 563 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 LOC110117498-PIK3R3F6TDL0 507 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 TMPRSS2O15393 492 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 MAGEB4O15481 346 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-211ENST00000477612 MTRF1O75570 445 aaKnown RBP18.02■□□□□ 0.48
COL9A3-211ENST00000477612 MMP9P14780 707 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 TGM4P49221 684 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 UBA52P62987 128 aaKnown RBP18.02■□□□□ 0.48
COL9A3-211ENST00000477612 GNG3P63215 75 aa18.02■□□□□ 0.48
COL9A3-211ENST00000477612 WDR38Q5JTN6 314 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms