RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 SPRY1O43609 319 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-220ENST00000477528 SSX5O60225 188 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 SERPINA7P05543 415 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 OMGP23515 440 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 CSF2RBP32927 897 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 EFNB2P52799 333 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 ZNF266Q14584 549 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 OR13C8Q8NGS7 320 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 GPX8Q8TED1 209 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 CCDC187A0A096LP49 1063 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 PLSCR5A0PG75 271 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 OR5H15A6NDH6 313 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 TGFBR3LH3BV60 316 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 PRKACAP17612 351 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 FCGR2CP31995 323 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 RAC3P60763 192 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 ANGPTL6Q8NI99 470 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 TMED6Q8WW62 240 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 AMELYQ99218 206 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 TRAF4Q9BUZ4 470 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-220ENST00000477528 ZFP64Q9NPA5 681 aa12.99□□□□□ -0.33
HDAC6-220ENST00000477528 TDRD6O60522 2096 aaKnown RBP12.98□□□□□ -0.33
HDAC6-220ENST00000477528 FAM221AA4D161 298 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 JTBO76095 146 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 CCL4P13236 92 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 CHATP28329 748 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 PLPPR5Q32ZL2 321 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 SUMF2Q8NBJ7 301 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 SLAMF9Q96A28 289 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 RTL8AQ9BWD3 113 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 DEFB127Q9H1M4 99 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 SLCO1B1Q9Y6L6 691 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 IGLV1-36A0A0B4J1U3 117 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 C9orf170A2RU37 121 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 ARGFXA6NJG6 315 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 DEGS1O15121 323 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 STARD6P59095 220 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 CATR1Q13166 79 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 C1orf210Q8IVY1 113 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 ZDHHC23Q8IYP9 409 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 DNASE2BQ8WZ79 361 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 CHST6Q9GZX3 395 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 SPTBP11277 2137 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 ANKRD34CP0C6C1 535 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 CCL11P51671 97 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 ERVK-16P61578 105 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 PAN3Q58A45 887 aaKnown RBP12.98□□□□□ -0.33
HDAC6-220ENST00000477528 LINC00114Q6XXX2 140 aa12.98□□□□□ -0.33
HDAC6-220ENST00000477528 LRP5LA4QPB2 252 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 TIMM8AO60220 97 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-220ENST00000477528 FSTP19883 344 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 PPT1P50897 306 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 HMGN3Q15651 99 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 ZNF774Q6NX45 483 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 GVQW1Q8N7I0 195 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 PTX4Q96A99 478 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 SGK3Q96BR1 496 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 SLC25A38Q96DW6 304 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 SF3B5Q9BWJ5 86 aaKnown RBP12.97□□□□□ -0.33
HDAC6-220ENST00000477528 SCN2AQ99250 2005 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 A0A1W2PPC1 479 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 TNFSF15O95150 251 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 GABRA1P14867 456 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 ZNF32P17041 273 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 MPLP40238 635 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 PIGPP57054 158 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 EGR4Q05215 589 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 FAHD2BQ6P2I3 314 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-220ENST00000477528 ZNF573Q86YE8 665 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 KCNRGQ8N5I3 272 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 HSD17B11Q8NBQ5 300 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 OR10D3Q8NH80 312 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 RTN4IP1Q8WWV3 396 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-220ENST00000477528 FAHD2AQ96GK7 314 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 TRBV5-7A0A0A0MS05 114 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 EFNB1P98172 346 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 FAM122BQ7Z309 247 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 OR4D6Q8NGJ1 314 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 LRRC46Q96FV0 321 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 PLEKHA2Q9HB19 425 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 ZNF354AO60765 605 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-220ENST00000477528 IL11P20809 199 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 RPL12P30050 165 aaKnown RBP12.97□□□□□ -0.33
HDAC6-220ENST00000477528 TAGLNQ01995 201 aaKnown RBP12.97□□□□□ -0.33
HDAC6-220ENST00000477528 ZNF529Q6P280 563 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 OR10J5Q8NHC4 309 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 MAFAQ8NHW3 353 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-220ENST00000477528 FAM213BQ8TBF2 198 aa12.97□□□□□ -0.33
HDAC6-220ENST00000477528 CDX2Q99626 313 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-220ENST00000477528 DUS4LO95620 317 aaKnown RBP12.96□□□□□ -0.33
HDAC6-220ENST00000477528 NKX2-1P43699 371 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-220ENST00000477528 HAAOP46952 286 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 MECP2P51608 486 aaKnown RBP12.96□□□□□ -0.33
HDAC6-220ENST00000477528 CLINT1Q14677 625 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 OR1C1Q15619 314 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 LRRTM1Q86UE6 522 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 FBXL14Q8N1E6 418 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 OR5M8Q8NGP6 311 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 RPS4Y2Q8TD47 263 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 APOBEC3DQ96AK3 386 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms