RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 ZMYND11Q15326 602 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 CDONQ4KMG0 1287 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 SPRNQ5BIV9 151 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 FDX2Q6P4F2 183 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 Q71RC1 249 aaPredicted RBP10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 SYS1Q8N2H4 156 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 BPIFB6Q8NFQ5 453 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 TMEM186Q96B77 213 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 C10orf35Q96D05 121 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 PBOV1Q9GZY1 135 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 TLNRD1Q9H1K6 362 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 PATZ1Q9HBE1 687 aaKnown RBP10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 TREM2Q9NZC2 230 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 MRM2Q9UI43 246 aaKnown RBP10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 MYRFQ9Y2G1 1151 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 EXOSC1Q9Y3B2 195 aaKnown RBP10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 PCDHGB5Q9Y5G0 923 aa10.4□□□□□ -0.74
CLCNKA-205ENST00000477360 A0A1W2PQL4 384 aaPredicted RBP10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 F5H0A9 414 aaPredicted RBP10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 FOXH1O75593 365 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 DHRS3O75911 302 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 LHBP01229 141 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 LIMS3P0CW19 117 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 LIMS4P0CW20 117 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 CCL1P22362 96 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 ANOS1P23352 680 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 HCCSP53701 268 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 GABARAPL2P60520 117 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 ZNF85Q03923 595 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 RIPPLY1Q0D2K3 151 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 ST3GAL4Q11206 333 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 SCGB2A2Q13296 93 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 FAM220AQ7Z4H9 259 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 MOGAT3Q86VF5 341 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 SEMA6DQ8NFY4 1073 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 OR8S1Q8NH09 359 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 ITPKCQ96DU7 683 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 TMEM80Q96HE8 168 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 SOX7Q9BT81 388 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 RTL8AQ9BWD3 113 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 SHARPINQ9H0F6 387 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 TMEM165Q9HC07 324 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 G6PC2Q9NQR9 355 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 ERVK13-1Q9NX77 482 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 RNF7Q9UBF6 113 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 MIOXQ9UGB7 285 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 OR52A1Q9UKL2 312 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 PPIAL4AQ9Y536 164 aa10.39□□□□□ -0.75
CLCNKA-205ENST00000477360 A0A0G2JMP0 313 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 A0A0X1KG70 313 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 DAPL1A0PJW8 107 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 OR5B21A6NL26 309 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 PRR32B1ATL7 298 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 FAM157AC9JC47 383 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 WNT9BO14905 357 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 APOL3O95236 402 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 PNPP00491 289 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 IFNA2P01563 188 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 TTRP02766 147 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 CDK1P06493 297 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 ACKR3P25106 362 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 CCR9P51686 369 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 ZNF404Q494X3 552 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 FAM120AOSQ5T036 256 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 AVPI1Q5T686 147 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 BCL2L15Q5TBC7 163 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 LIPNQ5VXI9 398 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 TMEM42Q69YG0 159 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 DCDC5Q6ZRR9 648 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 AHSA2Q719I0 299 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 NLRC3Q7RTR2 1065 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 SSX6Q7RTT6 188 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 RFLNBQ8N5W9 214 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 OR10H4Q8NGA5 316 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 OR4M2Q8NGB6 313 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 OR5A2Q8NGI9 324 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 OR10Z1Q8NGY1 313 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 OR5P3Q8WZ94 311 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 MYDGFQ969H8 173 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 C12orf43Q96C57 262 aaKnown RBP10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 LYZL4Q96KX0 146 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 DMRTB1Q96MA1 342 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 TECTBQ96PL2 329 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 HIST1H2AAQ96QV6 131 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 PAPOLGQ9BWT3 736 aaKnown RBP10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 CDCA4Q9BXL8 241 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 BEX2Q9BXY8 128 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 BRD7Q9NPI1 651 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 GPR84Q9NQS5 396 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 HIF1ANQ9NWT6 349 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 ENPP5Q9UJA9 477 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 PCDHB10Q9UN67 800 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 CAB39Q9Y376 341 aaPredicted RBP10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 RHBDD3Q9Y3P4 386 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 N6AMT1Q9Y5N5 214 aa10.38□□□□□ -0.75
CLCNKA-205ENST00000477360 TRAV38-1A0A0B4J264 116 aa10.37□□□□□ -0.75
CLCNKA-205ENST00000477360 ISPDA4D126 451 aa10.37□□□□□ -0.75
CLCNKA-205ENST00000477360 LGALS8O00214 317 aa10.37□□□□□ -0.75
CLCNKA-205ENST00000477360 ISG15P05161 165 aa10.37□□□□□ -0.75
CLCNKA-205ENST00000477360 WNT2P09544 360 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms