RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 GLIPR1L1Q6UWM5 242 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 SEZ6L2Q6UXD5 910 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 MRPL21Q7Z2W9 205 aaKnown RBP12.43□□□□□ -0.42
COL4A6-206ENST00000477085 FAM169BQ8N8A8 192 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 CHPT1Q8WUD6 406 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 GCDHQ92947 438 aaPredicted RBP12.43□□□□□ -0.42
COL4A6-206ENST00000477085 GAL3ST1Q99999 423 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 ACTR6Q9GZN1 396 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 CDH20Q9HBT6 801 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 MRPS28Q9Y2Q9 187 aaKnown RBP12.43□□□□□ -0.42
COL4A6-206ENST00000477085 AMDHD2Q9Y303 409 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 PRR14LQ5THK1 2151 aa12.43□□□□□ -0.42
COL4A6-206ENST00000477085 A0A1W2PP11 408 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 ISPDA4D126 451 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 WIPF3A6NGB9 483 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 CD300LBA8K4G0 201 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 MAGEB3O15480 346 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 PLA2G10O15496 165 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 SSX4O60224 188 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 BPNT1O95861 308 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 NAT2P11245 290 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 PTGFRP43088 359 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 MMP15P51511 669 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 ZP1P60852 638 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 PPP1CBP62140 327 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 MRPL49Q13405 166 aaKnown RBP12.42□□□□□ -0.42
COL4A6-206ENST00000477085 OXA1LQ15070 435 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 MOGAT2Q3SYC2 334 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 ZBTB37Q5TC79 503 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 AWAT2Q6E213 333 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 DCDC5Q6ZRR9 648 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 MOB3CQ70IA8 216 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 CENPSQ8N2Z9 138 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 TMEM104Q8NE00 496 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 RND1Q92730 232 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 TRIM63Q969Q1 353 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 FAM46BQ96A09 425 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 OR2J1Q9GZK6 312 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 OSGIN2Q9Y236 505 aa12.42□□□□□ -0.42
COL4A6-206ENST00000477085 LINC00854A0A1B0GVQ3 168 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 FAM230AA0A1W2PPH8 454 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 GGT3PA6NGU5 568 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 TMEM14DPA8MWL7 114 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 XRCC3O43542 346 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 CST4P01036 141 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 NR4A2P43354 598 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 ZNF83P51522 516 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 MTCP1P56278 107 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 DGCR2P98153 550 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 IGFBP7Q16270 282 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 ALKBH6Q3KRA9 238 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 OR2T2Q6IF00 324 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 FBXW12Q6X9E4 464 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 BHLHE23Q8NDY6 225 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 OR5L1Q8NGL2 311 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 SLC25A40Q8TBP6 338 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 SPSB1Q96BD6 273 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 CYYR1Q96J86 154 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 GPER1Q99527 375 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 THAP7Q9BT49 309 aaPredicted RBP12.41□□□□□ -0.42
COL4A6-206ENST00000477085 ATG5Q9H1Y0 275 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 EIF3KQ9UBQ5 218 aaKnown RBP12.41□□□□□ -0.42
COL4A6-206ENST00000477085 SPTA1P02549 2419 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 IGHV2OR16-5A0A0B4J2B6 119 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 OCMP0CE72 109 aaPredicted RBP12.41□□□□□ -0.42
COL4A6-206ENST00000477085 SPNP16150 400 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 ALDH3B1P43353 468 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 TAS2R20P59543 309 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 PRDX4Q13162 271 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 RNASE12Q5GAN4 147 aaKnown RBP12.41□□□□□ -0.42
COL4A6-206ENST00000477085 TMEM69Q5SWH9 247 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 ALKBH2Q6NS38 261 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 GDPD3Q7L5L3 318 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 RTN4RL2Q86UN3 420 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 POC5Q8NA72 575 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 OR1J1Q8NGS3 322 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 HPSE2Q8WWQ2 592 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 DVL3Q92997 716 aaPredicted RBP12.41□□□□□ -0.42
COL4A6-206ENST00000477085 YIPF5Q969M3 257 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 PTX4Q96A99 478 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 CMBLQ96DG6 245 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 FBLN5Q9UBX5 448 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 KCNN3Q9UGI6 736 aa12.41□□□□□ -0.42
COL4A6-206ENST00000477085 hCG_2014768A0A024R1R8 64 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 A0A0A6YYD4 124 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 J3QW42 95 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 CTDSPLO15194 276 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 CD3GP09693 182 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 RAB6AP20340 208 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 MPV17P39210 176 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 MNDAP41218 407 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 RFX2P48378 723 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 PPA1Q15181 289 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 PLCXD3Q63HM9 321 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 TMEM211Q6ICI0 200 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 MARS2Q96GW9 593 aaKnown RBP12.4□□□□□ -0.42
COL4A6-206ENST00000477085 PAPOLGQ9BWT3 736 aaKnown RBP12.4□□□□□ -0.42
COL4A6-206ENST00000477085 OPA3Q9H6K4 179 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 AUNIPQ9H7T9 357 aa12.4□□□□□ -0.42
COL4A6-206ENST00000477085 ELOVL5Q9NYP7 299 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms