RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 FAM58AQ8N1B3 248 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 OR5T1Q8NG75 326 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 OR6K6Q8NGW6 343 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 OR1L1Q8NH94 360 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 FAM131CQ96AQ9 280 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 DOK1Q99704 481 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 TBL1YQ9BQ87 522 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 SFXN3Q9BWM7 321 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 TM6SF2Q9BZW4 377 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 HEBP1Q9NRV9 189 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 FLVCR2Q9UPI3 526 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 BZW2Q9Y6E2 419 aaKnown RBP3.39□□□□□ -1.87
VPS50-212ENST00000476413 CENPVL3A0A0U1RRI6 287 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 M0R1X1 148 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 PTHP01270 115 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 ZNF286BP0CG31 522 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 APLNRP35414 380 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 PRLHRP49683 370 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 MLF1P58340 268 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 SLC35A1P78382 337 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 NAB1Q13506 487 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 COX19Q49B96 90 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 AP1ARQ63HQ0 302 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 MDP1Q86V88 176 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 PDCL2Q8N4E4 241 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 OR10Z1Q8NGY1 313 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 ENKURQ8TC29 256 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 DCAKDQ8WVC6 231 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 CPNE4Q96A23 557 aaPredicted RBP3.38□□□□□ -1.87
VPS50-212ENST00000476413 CENPNQ96H22 339 aaPredicted RBP3.38□□□□□ -1.87
VPS50-212ENST00000476413 CDX2Q99626 313 aaPredicted RBP3.38□□□□□ -1.87
VPS50-212ENST00000476413 SULT4A1Q9BR01 284 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 NUDT9Q9BW91 350 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 TMEM100Q9NV29 134 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 RHBDL2Q9NX52 303 aa3.38□□□□□ -1.87
VPS50-212ENST00000476413 FARSAQ9Y285 508 aaKnown RBP3.38□□□□□ -1.87
VPS50-212ENST00000476413 IGHV2OR16-5A0A0B4J2B6 119 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 C7orf66A4D0T2 115 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 ZNF850A8MQ14 1090 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 MANBAO00462 879 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 RTL8CO15255 209 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 UPK1BO75841 260 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 PCK1P35558 622 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 RPL31P62899 125 aaKnown RBP3.37□□□□□ -1.87
VPS50-212ENST00000476413 ST3GAL4Q11206 333 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 STK38Q15208 465 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 NDUFAF6Q330K2 333 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 GUSBP11Q6P575 273 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 ZNF101Q8IZC7 436 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 SPANXA2-OT1Q8N9U9 137 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 OR51A7Q8NH64 312 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 CIDECQ96AQ7 238 aaPredicted RBP3.37□□□□□ -1.87
VPS50-212ENST00000476413 S100PBPQ96BU1 408 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 CHCHD7Q9BUK0 85 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 FBXO6Q9NRD1 293 aaPredicted RBP3.37□□□□□ -1.87
VPS50-212ENST00000476413 NDRG2Q9UN36 371 aaKnown RBP3.37□□□□□ -1.87
VPS50-212ENST00000476413 LRRC42Q9Y546 428 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 S4R3C0 116 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 BRWD3Q6RI45 1802 aa3.37□□□□□ -1.87
VPS50-212ENST00000476413 YEATS2Q9ULM3 1422 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 IGHV3-49A0A0A0MS15 119 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 RFXANKO14593 260 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 PLIN3O60664 434 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 GALR1P47211 349 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 CMC4P56277 68 aaPredicted RBP3.36□□□□□ -1.87
VPS50-212ENST00000476413 PITPNAQ00169 270 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 ZNF616Q08AN1 781 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 PRSS8Q16651 343 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 YIF1BQ5BJH7 314 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 C6orf183Q5T699 404 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 APOBEC3HQ6NTF7 200 aaKnown RBP3.36□□□□□ -1.87
VPS50-212ENST00000476413 IGFL3Q6UXB1 125 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 ZCCHC24Q8N2G6 241 aaKnown RBP3.36□□□□□ -1.87
VPS50-212ENST00000476413 ZNF615Q8N8J6 731 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 RNF170Q96K19 258 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 C20orf144Q9BQM9 153 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 C21orf62Q9NYP8 219 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 CBY1Q9Y3M2 126 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 TMEM131Q92545 1883 aa3.36□□□□□ -1.87
VPS50-212ENST00000476413 AQRO60306 1485 aaKnown RBP eCLIP3.35□□□□□ -1.87
VPS50-212ENST00000476413 CCDC22O60826 627 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 ALOX12BO75342 701 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 SLC35G6P0C7Q6 338 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 IL1RNP18510 177 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 PAX6P26367 422 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 HTR2CP28335 458 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 NUP62P37198 522 aaPredicted RBP3.35□□□□□ -1.87
VPS50-212ENST00000476413 ELF3P78545 371 aaPredicted RBP3.35□□□□□ -1.87
VPS50-212ENST00000476413 MFSD14CQ5VZR4 134 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 DUPD1Q68J44 220 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 UNQ9165/PRO28630Q6UXU0 137 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 OR13G1Q8NGZ3 307 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 RNF157Q96PX1 679 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 NAPGQ99747 312 aaPredicted RBP3.35□□□□□ -1.87
VPS50-212ENST00000476413 LZTFL1Q9NQ48 299 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 STMN3Q9NZ72 180 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 ENOPH1Q9UHY7 261 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 PPIL1Q9Y3C6 166 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 JCADQ9P266 1359 aa3.35□□□□□ -1.87
VPS50-212ENST00000476413 IGHV6-1A0A0B4J1U7 121 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms