RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 BTNL8Q6UX41 500 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 LHFPL2Q6ZUX7 228 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 OTOSQ8NHW6 89 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 FAM46BQ96A09 425 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 ADIPOR1Q96A54 375 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 MVB12AQ96EY5 273 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 INTS14Q96SY0 518 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 POTEKPQ9BYX7 375 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 MRPL37Q9BZE1 423 aaKnown RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 METTL9Q9H1A3 318 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 RGCCQ9H4X1 137 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 LANCL2Q9NS86 450 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 IL19Q9UHD0 177 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 PUS1Q9Y606 427 aaKnown RBP eCLIP7.44□□□□□ -1.22
VAPB-205ENST00000476395 ADAMTS9Q9P2N4 1935 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 DCDC2BA2VCK2 349 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 MFNGO00587 321 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 CYB5AP00167 134 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 SCAND1P57086 179 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 TAS2R19P59542 299 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 ZNF117Q03924 483 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 EGR3Q06889 387 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 MIDNQ504T8 468 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 DRAM2Q6UX65 266 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 Q6ZSR6 202 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 C5orf24Q7Z6I8 188 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 ZNF676Q8N7Q3 588 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 OR13C9Q8NGT0 318 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 ASB5Q8WWX0 329 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 ASB17Q8WXJ9 295 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 NTNG2Q96CW9 530 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 TAAR9Q96RI9 348 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 TUBA4BQ9H853 241 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 GSKIPQ9P0R6 139 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 SPENQ96T58 3664 aaKnown RBP7.43□□□□□ -1.22
VAPB-205ENST00000476395 XKRY2A2RUG3 117 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 PHOX2AO14813 284 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 NPIPB7O75200 414 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HCKP08631 526 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 S100A10P60903 97 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 RAB32Q13637 225 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 ELOCQ15369 112 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 OR2I1PQ8NGU4 316 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 OR10J5Q8NHC4 309 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 MARCH1Q8TCQ1 289 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 TCTN2Q96GX1 697 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 OR10C1Q96KK4 312 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 DCBLD2Q96PD2 775 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 OPA3Q9H6K4 179 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 TAS2R8Q9NYW2 309 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 F5P12259 2224 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 A0A0U1RQK1 487 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 ZNF320A2RRD8 509 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 UMAD1C9J7I0 102 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 IFNL4K9M1U5 179 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 EFSO43281 561 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 CYTIPO60759 359 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HIST1H2BKO60814 126 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 NSA2O95478 260 aaKnown RBP7.43□□□□□ -1.22
VAPB-205ENST00000476395 IGKV3-11P04433 115 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HIST1H2BJP06899 126 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HOXB2P14652 356 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 IL11P20809 199 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 ZNF10P21506 573 aaPredicted RBP7.43□□□□□ -1.22
VAPB-205ENST00000476395 HNRNPA2B1P22626 353 aaKnown RBP7.43□□□□□ -1.22
VAPB-205ENST00000476395 HIST1H2BOP23527 126 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 PAX6P26367 422 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HIST1H2BBP33778 126 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HRH1P35367 487 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 PPICP45877 212 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HIST1H2BDP58876 126 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HIST1H2BCP62807 126 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 ZNF616Q08AN1 781 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 FZD2Q14332 565 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HIST2H2BEQ16778 126 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 MEP1BQ16820 701 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.43□□□□□ -1.22
VAPB-205ENST00000476395 WBP2NLQ6ICG8 309 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 RPUSD3Q6P087 351 aaKnown RBP7.43□□□□□ -1.22
VAPB-205ENST00000476395 VHLLQ6RSH7 139 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 SLC35D2Q76EJ3 337 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 METTL27Q8N6F8 245 aaPredicted RBP7.43□□□□□ -1.22
VAPB-205ENST00000476395 HIST1H2BHQ93079 126 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 OR8B4Q96RC9 309 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HIST1H2BNQ99877 126 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 HIST1H2BMQ99879 126 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 EIF5A2Q9GZV4 153 aaKnown RBP7.43□□□□□ -1.22
VAPB-205ENST00000476395 NXF5Q9H1B4 397 aaKnown RBP7.43□□□□□ -1.22
VAPB-205ENST00000476395 TAF9BQ9HBM6 251 aa7.43□□□□□ -1.22
VAPB-205ENST00000476395 IGKV1D-43A0A0B4J1Z2 117 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 SLC17A2O00624 439 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 HCRTR2O43614 444 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 MPZL1O95297 269 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 CRABP1P29762 137 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 DCAF7P61962 342 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 ADAM8P78325 824 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 QRFPP83859 136 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 DLX2Q07687 328 aaPredicted RBP7.42□□□□□ -1.22
VAPB-205ENST00000476395 GLYATL3Q5SZD4 288 aa7.42□□□□□ -1.22
VAPB-205ENST00000476395 SLC25A42Q86VD7 318 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms