RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PIGCQ92535 297 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 TBX5Q99593 518 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 C9orf16Q9BUW7 83 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 PBOV1Q9GZY1 135 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 ZMAT3Q9HA38 289 aaKnown RBP13.51□□□□□ -0.25
COL1A1-205ENST00000476387 CLN8Q9UBY8 286 aa13.51□□□□□ -0.25
COL1A1-205ENST00000476387 NUFIP1Q9UHK0 495 aaKnown RBP13.51□□□□□ -0.25
COL1A1-205ENST00000476387 ZNF816-ZNF321PA0A0X1KG74 233 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 OOEPA6NGQ2 149 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 ZNF850A8MQ14 1090 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 LOC110117498-PIK3R3F6TDL0 507 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 CST4P01036 141 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 KRT8P05787 483 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 ATP6V1B1P15313 513 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 PAX2Q02962 417 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 MFGE8Q08431 387 aaPredicted RBP13.5□□□□□ -0.25
COL1A1-205ENST00000476387 TMED1Q13445 227 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 ZIK1Q3SY52 487 aaPredicted RBP13.5□□□□□ -0.25
COL1A1-205ENST00000476387 KLF17Q5JT82 389 aaPredicted RBP13.5□□□□□ -0.25
COL1A1-205ENST00000476387 BCL2L15Q5TBC7 163 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 KCTD8Q6ZWB6 473 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 THAP5Q7Z6K1 395 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 ZDHHC23Q8IYP9 409 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 GALNT4Q8N4A0 578 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 OR1M1Q8NGA1 313 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 OR10H4Q8NGA5 316 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 OR51E1Q8TCB6 317 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 LRRC29Q8WV35 223 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 ITFG2Q969R8 447 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 ITPKCQ96DU7 683 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 FAM71F1Q96KD3 344 aaPredicted RBP13.5□□□□□ -0.25
COL1A1-205ENST00000476387 HIST1H2AAQ96QV6 131 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 APOL4Q9BPW4 351 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 S100A14Q9HCY8 104 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 GPR84Q9NQS5 396 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 ZNF69Q9UC07 566 aa13.5□□□□□ -0.25
COL1A1-205ENST00000476387 MGAM2Q2M2H8 2515 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 TMEM210A6NLX4 147 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 APOL3O95236 402 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 OR2T7P0C7T2 308 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 CSNK2BP67870 215 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 HOXA4Q00056 320 aaPredicted RBP13.49□□□□□ -0.25
COL1A1-205ENST00000476387 BTNL3Q6UXE8 466 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 WDR86Q86TI4 376 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 PQLC1Q8N2U9 271 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 GCSAMQ8N6F7 178 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 SIGLECL1Q8N7X8 197 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 YIPF7Q8N8F6 280 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 OR2T27Q8NH04 317 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 TRUB1Q8WWH5 349 aaKnown RBP13.49□□□□□ -0.25
COL1A1-205ENST00000476387 STMN2Q93045 179 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 EME1Q96AY2 570 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 HRASLS5Q96KN8 279 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 TECTBQ96PL2 329 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 PPP1R3EQ9H7J1 279 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 RNPEPL1Q9HAU8 725 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL1A1-205ENST00000476387 R4GMQ9 66 aa13.49□□□□□ -0.25
COL1A1-205ENST00000476387 IGHV2-70DA0A0C4DH43 119 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 ADAM20O43506 726 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 NDUFA2O43678 99 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 MTRF1O75570 445 aaKnown RBP13.48□□□□□ -0.25
COL1A1-205ENST00000476387 PRTN3P24158 256 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 NPY4RP50391 375 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 RIPPLY1Q0D2K3 151 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 WDR25Q64LD2 544 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-205ENST00000476387 LYPD2Q6UXB3 125 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 WDR82Q6UXN9 313 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 PLEKHG7Q6ZR37 379 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 C9orf139Q6ZV77 190 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 SGMS2Q8NHU3 365 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 RAB40AQ8WXH6 277 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 OR5P3Q8WZ94 311 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 DACT3Q96B18 629 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-205ENST00000476387 RNF170Q96K19 258 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 ERVK-18Q9QC07 812 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 MRM2Q9UI43 246 aaKnown RBP13.48□□□□□ -0.25
COL1A1-205ENST00000476387 OR52A1Q9UKL2 312 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 SNX5Q9Y5X3 404 aa13.48□□□□□ -0.25
COL1A1-205ENST00000476387 A0A1W2PQL4 384 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-205ENST00000476387 SNTNA6NMZ2 147 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 CDIPTO14735 213 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 MAGEB4O15481 346 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-205ENST00000476387 DHRS3O75911 302 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 RPP14O95059 124 aaKnown RBP13.47□□□□□ -0.25
COL1A1-205ENST00000476387 GYPAP02724 150 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 TTRP02766 147 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 EGR1P18146 543 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 PSMB10P40306 273 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 MICBQ29980 383 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 AWAT1Q58HT5 328 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 ZBTB37Q5TC79 503 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 MEDAGQ5VYS4 303 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 SSX6Q7RTT6 188 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 FAM220AQ7Z4H9 259 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 HPSE2Q8WWQ2 592 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 UPRTQ96BW1 309 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 TLNRD1Q9H1K6 362 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 ENPP5Q9UJA9 477 aa13.47□□□□□ -0.25
COL1A1-205ENST00000476387 PIGLQ9Y2B2 252 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms