RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PSME4Q14997 1843 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 A0A1W2PS29 197 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 OTOL1A6NHN0 477 aaPredicted RBP4.11□□□□□ -1.75
CCNL1-215ENST00000474539 CYR61O00622 381 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 G0S2P27469 103 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 S100A2P29034 98 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 HAAOP46952 286 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 POU4F3Q15319 338 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 INPP5JQ15735 1006 aaPredicted RBP4.11□□□□□ -1.75
CCNL1-215ENST00000474539 IZUMO4Q1ZYL8 232 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 ATPAF1Q5TC12 328 aaPredicted RBP4.11□□□□□ -1.75
CCNL1-215ENST00000474539 KIRREL2Q6UWL6 708 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 ANKRD13BQ86YJ7 626 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 SAXO1Q8IYX7 474 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 OR5AS1Q8N127 324 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 TMEM151AQ8N4L1 468 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 OR52L2PQ8NGH6 319 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 OR51L1Q8NGJ5 315 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 RHOXF1Q8NHV9 184 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 ABHD3Q8WU67 409 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 ASB10Q8WXI3 467 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 GHSRQ92847 366 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 MCHR2Q969V1 340 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 SMIM19Q96E16 107 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 PLEKHA2Q9HB19 425 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 FAM212BQ9NTI7 297 aaPredicted RBP4.11□□□□□ -1.75
CCNL1-215ENST00000474539 TMEM38BQ9NVV0 291 aa4.11□□□□□ -1.75
CCNL1-215ENST00000474539 A0A1W2PNV4 684 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 RAB19A4D1S5 217 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 TRIM77I1YAP6 450 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 NDUFS8O00217 210 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 NTN3O00634 580 aaPredicted RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 CLDN1O95832 211 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 COX6A1P12074 109 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 SRMP19623 302 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 APEX1P27695 318 aaKnown RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 OR2B8PP59922 312 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 SORDQ00796 357 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 MEF2CQ06413 473 aaPredicted RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 PRDX4Q13162 271 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 PCOLCEQ15113 449 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ZXDCQ2QGD7 858 aaPredicted RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ACOT6Q3I5F7 207 aaPredicted RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 SPINK14Q6IE38 97 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 SEZ6L2Q6UXD5 910 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 SPACA3Q8IXA5 215 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 SECTM1Q8WVN6 248 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 CMBLQ96DG6 245 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 FCRL1Q96LA6 429 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 BEX2Q9BXY8 128 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 PKIBQ9C010 78 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 TREM1Q9NP99 234 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 EMC7Q9NPA0 242 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 CISD1Q9NZ45 108 aaKnown RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 PARP14Q460N5 1801 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 CDK5RAP2Q96SN8 1893 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 LOC102723996A0A087X1L8 192 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 A0A096LPE4 126 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 MDFIC2A0A1B0GVS7 189 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 A0A1W2PPZ6 126 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 TMEM82A0PJX8 343 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 E5RGE8 158 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 GPR31O00270 319 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 LYRM1O43325 122 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 TSPAN15O95858 294 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 NGFP01138 241 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 IGHA2P01877 340 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 GAPDHP04406 335 aaKnown RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ALPLP05186 524 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ZNF32P17041 273 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ELK1P19419 428 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 GATA3P23771 443 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 PSMB10P40306 273 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ZNF121P58317 390 aaPredicted RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 RPL11P62913 178 aaKnown RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ZFP36L1Q07352 338 aaKnown RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 C4orf17Q53FE4 359 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 NSUN5P2Q63ZY6 315 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ZNF385CQ66K41 422 aaPredicted RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 CNIH2Q6PI25 160 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 STXBP6Q8NFX7 210 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ZNF721Q8TF20 911 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 SSC4DQ8WTU2 575 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 SIGLEC11Q96RL6 698 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 DHRS9Q9BPW9 319 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 CDCA4Q9BXL8 241 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ZNF385DQ9H6B1 395 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ZMAT3Q9HA38 289 aaKnown RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 IL20Q9NYY1 176 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 PRNDQ9UKY0 176 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 STRAPQ9Y3F4 350 aaKnown RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 CEPT1Q9Y6K0 416 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 EVPLQ92817 2033 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ZSCAN5BA6NJL1 495 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 ZAR1LA6NP61 321 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 LEUTXA8MZ59 168 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 MS4A18H0YCH9 400 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 DNASE2O00115 360 aaPredicted RBP4.1□□□□□ -1.75
CCNL1-215ENST00000474539 MGST3O14880 152 aa4.1□□□□□ -1.75
CCNL1-215ENST00000474539 DXOO77932 396 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms