RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 POPDC3Q9HBV1 291 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 ASB6Q9NWX5 421 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 TAS2R16Q9NYV7 291 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 SLC23A2Q9UGH3 650 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 AK6Q9Y3D8 172 aaKnown RBP3.04□□□□□ -1.92
UBR3-208ENST00000474426 RPRD2Q5VT52 1461 aaKnown RBP3.04□□□□□ -1.92
UBR3-208ENST00000474426 ABCC2Q92887 1545 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 NCKAP5O14513 1909 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 TRBV9A0A0B4J1U6 114 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 A0A0G2JLM5 398 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 M0R233 179 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 MYL12BO14950 172 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 OR5G3P0C626 314 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 CHRNB2P17787 502 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 RPL35AP18077 110 aaKnown RBP3.04□□□□□ -1.92
UBR3-208ENST00000474426 MYL12AP19105 171 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 RAB5AP20339 215 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 CRHBPP24387 322 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 RAB10P61026 200 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 RPL15P61313 204 aaKnown RBP3.04□□□□□ -1.92
UBR3-208ENST00000474426 SELENOWP63302 87 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 PRR20EP86478 221 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 PRR20CP86479 221 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 PRR20DP86480 221 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 PRR20BP86481 221 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 PRR20AP86496 221 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 ZNF415Q09FC8 603 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 TMEM132DQ14C87 1099 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 AGERQ15109 404 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 DCAF4L1Q3SXM0 396 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 TDRG1Q3Y452 100 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 TMEM97Q5BJF2 176 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 CRB2Q5IJ48 1285 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 LYPLAL1Q5VWZ2 237 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 STUMQ69YW2 141 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 C22orf42Q6IC83 251 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 FAM19A5Q7Z5A7 132 aaPredicted RBP3.04□□□□□ -1.92
UBR3-208ENST00000474426 FAM126BQ8IXS8 530 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 ZNF418Q8TF45 676 aaPredicted RBP3.04□□□□□ -1.92
UBR3-208ENST00000474426 TFAP2CQ92754 450 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 KIRREL1Q96J84 757 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 BTF3L4Q96K17 158 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 PNMA5Q96PV4 448 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 TIMP4Q99727 224 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 SPATA25Q9BR10 227 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 THTPAQ9BU02 230 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 PRO0628Q9UI54 55 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 STRCQ7RTU9 1775 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 ROBO3Q96MS0 1386 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 ZNF106Q9H2Y7 1883 aaKnown RBP3.04□□□□□ -1.92
UBR3-208ENST00000474426 IFT172Q9UG01 1749 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 SMIM35A0A1B0GVV1 85 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 A0A1W2PRF3 423 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 A0A1W2PRM7 423 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 UBE2QL1A1L167 161 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 TMEM8BA6NDV4 472 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 OR4C46A6NHA9 309 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 WTIPA6NIX2 430 aaPredicted RBP3.04□□□□□ -1.92
UBR3-208ENST00000474426 ADM5C9JUS6 153 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 PRAMEF10O60809 474 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 GCGP01275 180 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 CD1AP06126 327 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 HIST1H1TP22492 207 aaPredicted RBP3.04□□□□□ -1.92
UBR3-208ENST00000474426 NTF4P34130 210 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 REG1BP48304 166 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 BCL2L1Q07817 233 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 VWA2Q5GFL6 755 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 TMEM255AQ5JRV8 349 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 ZNF648Q5T619 568 aaPredicted RBP3.04□□□□□ -1.92
UBR3-208ENST00000474426 C12orf54Q6X4T0 127 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 ADAMTSL5Q6ZMM2 481 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 FRRS1Q6ZNA5 592 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 GOLGA7Q7Z5G4 137 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 LINC00471Q8N535 108 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 TMEM86BQ8N661 226 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 BLNKQ8WV28 456 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 ZBP1Q9H171 429 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 MAGIXQ9H6Y5 334 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 CWH43Q9H720 699 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 SMCO4Q9NRQ5 59 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 OR51B2Q9Y5P1 312 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 ENPP4Q9Y6X5 453 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 ZFYVE16Q7Z3T8 1539 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 MADDQ8WXG6 1647 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 CCDC88AQ3V6T2 1871 aa3.04□□□□□ -1.92
UBR3-208ENST00000474426 GLYATL1P3A0A0U1RQE8 302 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 ATP6AP2A0A1C7CYW4 349 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 G3V2L1 256 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 SAP18O00422 153 aaKnown RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 HMGB3O15347 200 aaKnown RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 HCRTR1O43613 425 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 ZNF682O95780 498 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 OR4A8P0C604 315 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 FTH1P19P0C7X4 201 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 CD1DP15813 335 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 MGMTP16455 207 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 CSRP1P21291 193 aaKnown RBP3.03□□□□□ -1.92
UBR3-208ENST00000474426 HRH1P35367 487 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 XGP55808 180 aa3.03□□□□□ -1.92
UBR3-208ENST00000474426 PFN3P60673 137 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms