RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 DCAF16Q9NXF7 216 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 ZNF229Q9UJW7 825 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 DDX19BQ9UMR2 479 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 RABL2BQ9UNT1 228 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 CARHSP1Q9Y2V2 147 aaKnown RBP1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 ZBED9Q6R2W3 1325 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 ADGRA3Q8IWK6 1321 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 A0A0A6YYD5 115 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 A0A0G2JMP0 313 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 A0A0X1KG70 313 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 LRRIQ4A6NIV6 560 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 CTNSO60931 367 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 KLHL2O95198 593 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 TRBV12-3P01733 135 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 IGHV1-46P01743 117 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 UBCP0CG48 685 aaKnown RBP1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 INAFM2P0DMQ5 153 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 LGALS3P17931 250 aaKnown RBP1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 PSMB2P49721 201 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 C2orf54Q08AI8 447 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 ADIGQ0VDE8 80 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 WDR43Q15061 677 aaKnown RBP eCLIP1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 OR1Q1Q15612 314 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 DEFB134Q4QY38 66 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 SLC30A8Q8IWU4 369 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 STK40Q8N2I9 435 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 LINC00469Q8N7U9 141 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 OR56A4Q8NGH8 313 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 ING5Q8WYH8 240 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 DYNLL2Q96FJ2 89 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 DUSP21Q9H596 190 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 VPS37BQ9H9H4 285 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 CHRAC1Q9NRG0 131 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 ASF1BQ9NVP2 202 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 MYEF2Q9P2K5 600 aaKnown RBP1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 RWDD2AQ9UIY3 292 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 ZNF257Q9Y2Q1 563 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 SLC22A7Q9Y694 548 aa1.51□□□□□ -2.17
ECHDC1-213ENST00000474240 ZNF878C9JN71 531 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 RGS5O15539 181 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 SLC19A2O60779 497 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 MPDU1O75352 247 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 NRASP01111 189 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 HRASP01112 189 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 KRASP01116 189 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 THRAP10827 490 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 CXCR1P25024 350 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 ARL2P36404 184 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 OR1G1P47890 313 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 TGM4P49221 684 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 MTPNP58546 118 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 CUL2Q13617 745 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 FAM53BQ14153 422 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 C6orf99Q4VX62 202 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 PYDC2Q56P42 97 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 TMEM69Q5SWH9 247 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 OR2T5Q6IEZ7 315 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 HCP5Q6MZN7 132 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 MORN3Q6PF18 240 aaPredicted RBP1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 TBPL2Q6SJ96 375 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 TRMT10CQ7L0Y3 403 aaKnown RBP1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 DAZ4Q86SG3 579 aaKnown RBP1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 RAB43Q86YS6 212 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 KRTAP13-1Q8IUC0 172 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 OR2T29Q8NH02 315 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 OR52E5Q8NH55 327 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 OR51F2Q8NH61 342 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 CA5BP1Q8WTZ4 195 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 APH1AQ96BI3 265 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 YIPF6Q96EC8 236 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 Q96MT0 163 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 SCGB3A2Q96PL1 93 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 MYCBPQ99417 103 aaPredicted RBP1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 BPIFA3Q9BQP9 254 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 UQCC2Q9BRT2 126 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 DEFB129Q9H1M3 183 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 LINC00574Q9H8X3 128 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 CD209Q9NNX6 404 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 DAZ1Q9NQZ3 744 aaKnown RBP1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 PXMP2Q9NR77 195 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 HEBP1Q9NRV9 189 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 STX18Q9P2W9 335 aaKnown RBP1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 NDRG2Q9UN36 371 aaKnown RBP1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 MMACHCQ9Y4U1 282 aa1.5□□□□□ -2.17
ECHDC1-213ENST00000474240 C4orf51C9J302 202 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 TDP2O95551 362 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 TTC4O95801 387 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 IGLV2-8P01709 118 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 CDK1P06493 297 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 SLC35G6P0C7Q6 338 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 CD28P10747 220 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 MLNP12872 115 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 GALP22466 123 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 SERPINB8P50452 374 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 UBE2MP61081 183 aaKnown RBP1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 BEX3Q00994 111 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 ATP5G2Q06055 141 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 ITIH4Q14624 930 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 CPTPQ5TA50 214 aa1.49□□□□□ -2.17
ECHDC1-213ENST00000474240 STEAP4Q687X5 459 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms