RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PLCZ1Q86YW0 608 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 BLIDQ8IZY5 108 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF786Q8N393 782 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 FAM71E2Q8N5Q1 922 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 C8orf31Q8N9H6 132 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 C20orf203Q8NBC4 194 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 PROKR2Q8NFJ6 384 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 OR5T3Q8NGG3 340 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 OR6Q1Q8NGQ2 317 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 CDC26Q8NHZ8 85 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 TEX47Q8TBZ9 253 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 BLOC1S5Q8TDH9 187 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 PHF10Q8WUB8 498 aaKnown RBP3.02□□□□□ -1.93
BRCA1-212ENST00000473961 KCTD4Q8WVF5 259 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 RPUSD4Q96CM3 377 aaKnown RBP3.02□□□□□ -1.93
BRCA1-212ENST00000473961 CCDC124Q96CT7 223 aaKnown RBP3.02□□□□□ -1.93
BRCA1-212ENST00000473961 PHYHIPLQ96FC7 376 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 CERS2Q96G23 380 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 PDXPQ96GD0 296 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 TSSK3Q96PN8 268 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 MICU1Q9BPX6 476 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 GABARAPL3Q9BY60 117 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 UCK2Q9BZX2 261 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 C8orf33Q9H7E9 229 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-212ENST00000473961 EFCAB1Q9HAE3 211 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 KCNJ16Q9NPI9 418 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF226Q9NYT6 803 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 GLTPQ9NZD2 209 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 AHSPQ9NZD4 102 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 SLC17A7Q9P2U7 560 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 GLS2Q9UI32 602 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 CACNG2Q9Y698 323 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 CCDC88AQ3V6T2 1871 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ATRNO75882 1429 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 FLT4P35916 1363 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 RIMBP3CA6NJZ7 1639 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 RIMBP3BA6NNM3 1639 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 A0A0G2JLM5 398 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 A0A0J9YYE9 177 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 A0A1W2PRG6 482 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF98A6NK75 572 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 LEUTXA8MZ59 168 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 COPEO14579 308 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 GATCO43716 136 aaKnown RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 CDC40O60508 579 aaKnown RBP eCLIP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 FCN3O75636 299 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 KCNK2O95069 426 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 C6orf47O95873 294 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 CCNE2O96020 404 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 TRBC1P01850 177 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 HBE1P02100 147 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 IGKV5-2P06315 115 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 IGHV4-34P06331 123 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 S100A9P06702 114 aaKnown RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 SERPINE2P07093 398 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 PSKH1P11801 424 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF250P15622 560 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 MGMTP16455 207 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 RAB3AP20336 220 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 FUT3P21217 361 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 WARSP23381 471 aaKnown RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 RBMXP38159 391 aaKnown RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 PSMD8P48556 350 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 SLC11A1P49279 550 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 TAF6P49848 677 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 OR2B6P58173 313 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 RPS21P63220 83 aaKnown RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 ILKQ13418 452 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 FZD2Q14332 565 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 QPRTQ15274 297 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 OR7A5Q15622 319 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 NKAIN1Q4KMZ8 207 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 PIGGQ5H8A4 983 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 RBM48Q5RL73 367 aaKnown RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 H3F3CQ6NXT2 135 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 DCUN1D2Q6PH85 259 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 PGAM4Q8N0Y7 254 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 RNF175Q8N4F7 328 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 CCNYL1Q8N7R7 359 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 DCAF4L2Q8NA75 395 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 LINC01555Q8NAE3 123 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 HSD17B11Q8NBQ5 300 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 ZFP90Q8TF47 636 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 DCAKDQ8WVC6 231 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 GTF2H4Q92759 462 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 FAM3DQ96BQ1 224 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 LRRC39Q96DD0 335 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 AURKBQ96GD4 344 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 C9orf16Q9BUW7 83 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 C6orf62Q9GZU0 229 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 NAA50Q9GZZ1 169 aaKnown RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 LINC00597Q9H2U6 94 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 CYP3A43Q9HB55 503 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 DYRK4Q9NR20 520 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 FAM49BQ9NUQ9 324 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 PAQR5Q9NXK6 330 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF225Q9UK10 706 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 HEBP2Q9Y5Z4 205 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 KCNE3Q9Y6H6 103 aa3.01□□□□□ -1.93
BRCA1-212ENST00000473961 SMAD5-AS1Q9Y6J3 95 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms