RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 TPOP07202 933 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 ERCC1P07992 297 aaPredicted RBP5.39□□□□□ -1.55
CLK1-210ENST00000473565 GTF2F2P13984 249 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 HLA-DMAP28067 261 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 IDH3GP51553 393 aaPredicted RBP5.39□□□□□ -1.55
CLK1-210ENST00000473565 MTCP1P56278 107 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 SCAND1P57086 179 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 RIPPLY1Q0D2K3 151 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 CBX3Q13185 183 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 LINC00303Q3SY05 128 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 ACSF3Q4G176 576 aaPredicted RBP5.39□□□□□ -1.55
CLK1-210ENST00000473565 IGFL3Q6UXB1 125 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 SEM1Q6ZVN7 128 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 FAM214BQ7L5A3 538 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 OR4C16Q8NGL9 310 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 OR56B4Q8NH76 319 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 DACT3Q96B18 629 aaPredicted RBP5.39□□□□□ -1.55
CLK1-210ENST00000473565 CCDC120Q96HB5 630 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 RADILQ96JH8 1075 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 UQCC2Q9BRT2 126 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 LPAR5Q9H1C0 372 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 TP63Q9H3D4 680 aaPredicted RBP5.39□□□□□ -1.55
CLK1-210ENST00000473565 MTFP1Q9UDX5 166 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 HEATR1Q9H583 2144 aaKnown RBP5.39□□□□□ -1.55
CLK1-210ENST00000473565 A0A0A6YYJ9 748 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 OR6C65A6NJZ3 312 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 ZNF850A8MQ14 1090 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 TMEM127O75204 238 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 AGFG2O95081 481 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 PRF1P14222 555 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 WNT5AP41221 380 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 PTGFRP43088 359 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 GK2Q14410 553 aaPredicted RBP5.39□□□□□ -1.55
CLK1-210ENST00000473565 GSG1Q2KHT4 349 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 CDNFQ49AH0 187 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 OR52W1Q6IF63 320 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 RFPL4BQ6ZWI9 263 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 MOB3CQ70IA8 216 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 OR56B2PQ8NGI1 322 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 OR6F1Q8NGZ6 308 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 POM121L2Q96KW2 1035 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 C1QTNF5Q9BXJ0 243 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 OPN3Q9H1Y3 402 aaPredicted RBP5.39□□□□□ -1.55
CLK1-210ENST00000473565 NEK6Q9HC98 313 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 RANGRFQ9HD47 186 aaPredicted RBP5.39□□□□□ -1.55
CLK1-210ENST00000473565 PLSCR2Q9NRY7 297 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 RAB22AQ9UL26 194 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 ROS1P08922 2347 aa5.39□□□□□ -1.55
CLK1-210ENST00000473565 SMLR1H3BR10 107 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 ARPC1BO15143 372 aaKnown RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 TOXO94900 526 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 TMEM225BP0DP42 221 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 IL32P24001 234 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 PER3P56645 1201 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 ERVS71-1P61550 626 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 PDCD1Q15116 288 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 PRR30Q53SZ7 412 aaPredicted RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 PLAC9Q5JTB6 97 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 ATAD3CQ5T2N8 411 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 NCCRP1Q6ZVX7 275 aaPredicted RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 FJX1Q86VR8 437 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 DRAXINQ8NBI3 349 aaPredicted RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 GPX8Q8TED1 209 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 PP6455Q8WZ26 134 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 CREB3L1Q96BA8 519 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 ST6GAL2Q96JF0 529 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 TMEM59Q9BXS4 323 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 TINAGL1Q9GZM7 467 aaPredicted RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 FGF23Q9GZV9 251 aaPredicted RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 IGHV3-64DA0A0J9YX35 117 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 METTL21EPA6NDL7 271 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 MKRN2OSH3BPM6 223 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 NRASP01111 189 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 FAM87AP0C7U9 286 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 ANXA7P20073 488 aaKnown RBP5.38□□□□□ -1.55
CLK1-210ENST00000473565 TMEM50BP56557 158 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 DYRK1AQ13627 763 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 STK11Q15831 433 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 NKPD1Q17RQ9 610 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 ZNF260Q3ZCT1 412 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 NRN1LQ496H8 165 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 PLCXD3Q63HM9 321 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 RTL6Q6ICC9 239 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 BRICD5Q6PL45 260 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 DNM1P46Q6ZS02 220 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 TRAPPC6BQ86SZ2 158 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 CD163Q86VB7 1156 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 ZNF610Q8N9Z0 462 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 OR51S1Q8NGJ8 323 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 MAFIPQ8WZ33 124 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 ITPKCQ96DU7 683 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 ARHGAP5-AS1Q96IT6 56 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 C20orf85Q9H1P6 137 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 SH3BGRL2Q9UJC5 107 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 KCNK7Q9Y2U2 307 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 COL6A6A6NMZ7 2263 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 ARPC4-TTLL3A0A0A6YYG9 625 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 IGKV1-12A0A0C4DH73 117 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 SSX5O60225 188 aa5.38□□□□□ -1.55
CLK1-210ENST00000473565 IGKV1D-12P01611 117 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms