RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	C11orf53	Q8IXP5	236 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	ZDHHC23	Q8IYP9	409 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	CMTM4	Q8IZR5	234 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	HS3ST5	Q8IZT8	346 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	GALNT4	Q8N4A0	578 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	TMEM86B	Q8N661	226 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	FAM216B	Q8N7L0	139 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	SCCPDH	Q8NBX0	429 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	BBS1	Q8NFJ9	593 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	SSMEM1	Q8WWF3	244 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	LHX4	Q969G2	390 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	TMIGD2	Q96BF3	282 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	HIST1H2AA	Q96QV6	131 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	CCL13	Q99616	98 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	PKP2	Q99959	881 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	PRRG3	Q9BZD7	231 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	SIRPD	Q9H106	197 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	ZNF696	Q9H7X3	374 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	CNTD2	Q9H8S5	307 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	SLC25A19	Q9HC21	320 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	TNFRSF19	Q9NS68	423 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	ACOXL	Q9NUZ1	547 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	ZNF319	Q9P2F9	582 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	ONECUT1	Q9UBC0	465 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	DNAJB9	Q9UBS3	223 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	RPUSD1	Q9UJJ7	312 aa	Known RBP	7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	LRP12	Q9Y561	859 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	KPTN	Q9Y664	436 aa		7.38	□□□□□ -1.23
CHEK2-223	ENST00000472807	ZNF816-ZNF321P	A0A0X1KG74	233 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807		A0A1B0GUS0	222 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807		A0A1B0GVI7	797 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	TCRBV3S1	A0A5B6	114 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	FAM181B	A6NEQ2	426 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	GPR37	O15354	613 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	FKBP6	O75344	327 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	DNAJC8	O75937	253 aa	Predicted RBP	7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	MELTF	P08582	738 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	MDK	P21741	143 aa	Predicted RBP	7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	PRKACG	P22612	351 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	SLC2A5	P22732	501 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	ACKR3	P25106	362 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	GMFB	P60983	142 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	ARF6	P62330	175 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	APOF	Q13790	326 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	SNAPC1	Q16533	368 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	CDON	Q4KMG0	1287 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	LRRC10	Q5BKY1	277 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	STUM	Q69YW2	141 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	FIP1L1	Q6UN15	594 aa	Known RBP	7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	VMO1	Q7Z5L0	202 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	KIR3DL3	Q8N743	410 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	PAPD5	Q8NDF8	572 aa	Known RBP	7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	OR8B12	Q8NGG6	310 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	OR10Z1	Q8NGY1	313 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	OR4F5	Q8NH21	305 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	TBC1D15	Q8TC07	691 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	OR5P3	Q8WZ94	311 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	PIGC	Q92535	297 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	MRO	Q9BYG7	248 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	YIPF3	Q9GZM5	350 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	DNTTIP1	Q9H147	329 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	PPP1R3E	Q9H7J1	279 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	BEX1	Q9HBH7	125 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	PAPOLB	Q9NRJ5	636 aa	Known RBP	7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	HAO2	Q9NYQ3	351 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	TVP23B	Q9NYZ1	205 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	KLHDC2	Q9Y2U9	406 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	MMP24	Q9Y5R2	645 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	POMT1	Q9Y6A1	747 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	TMEM14A	Q9Y6G1	99 aa		7.37	□□□□□ -1.23
CHEK2-223	ENST00000472807	NOTCH1	P46531	2555 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807		A0A0U1RQV5	110 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	TMEM269	A0A1B0GVZ9	245 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807		A0A1B0GW55	424 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	ACOD1	A6NK06	481 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	DYNC1I1	O14576	645 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	FCN3	O75636	299 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	KNG1	P01042	644 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	MRPL3	P09001	348 aa	Known RBP	7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	DUX4L2	P0CJ85	424 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	DUX4L3	P0CJ86	424 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	DUX4L4	P0CJ87	422 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	DUX4L5	P0CJ88	424 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	DUX4L6	P0CJ89	424 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	DUX4L7	P0CJ90	424 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	ALOX5AP	P20292	161 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	OMG	P23515	440 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	MAP2K3	P46734	347 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	GPM6A	P51674	278 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	RAG2	P55895	527 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	RPL15	P61313	204 aa	Known RBP	7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	ZNF829	Q3KNS6	432 aa	Predicted RBP	7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	TMEM236	Q5W0B7	351 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	DEGS2	Q6QHC5	323 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	DUX4L9	Q6RFH8	374 aa	Predicted RBP	7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	C17orf107	Q6ZR85	190 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	THAP5	Q7Z6K1	395 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	PDZD9	Q8IXQ8	264 aa		7.36	□□□□□ -1.23
CHEK2-223	ENST00000472807	BCAS4	Q8TDM0	211 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms