RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ZNF362Q5T0B9 420 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-211ENST00000471260 C1orf87Q8N0U7 546 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 OR5AS1Q8N127 324 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 LNX2Q8N448 690 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 CELF2-AS1Q8N7Q2 184 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 ERGIC1Q969X5 290 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 MEGF10Q96KG7 1140 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 CHCHD6Q9BRQ6 235 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 TEX12Q9BXU0 123 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 SLC22A4Q9H015 551 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 OR51E2Q9H255 320 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 C7orf69Q9H7B7 122 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 SMURF1Q9HCE7 757 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 PNRC2Q9NPJ4 139 aaKnown RBP11.36□□□□□ -0.59
HMGN1-211ENST00000471260 TMEM100Q9NV29 134 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 MRPL22Q9NWU5 206 aaKnown RBP11.36□□□□□ -0.59
HMGN1-211ENST00000471260 DCAF16Q9NXF7 216 aa11.36□□□□□ -0.59
HMGN1-211ENST00000471260 EXOSC1Q9Y3B2 195 aaKnown RBP11.36□□□□□ -0.59
HMGN1-211ENST00000471260 NOP16Q9Y3C1 178 aaKnown RBP11.36□□□□□ -0.59
HMGN1-211ENST00000471260 LOC105371242A0A075B767 164 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 LRRC30A6NM36 301 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 A8MXK9 166 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 F5H0A9 414 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-211ENST00000471260 H3BN98 237 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 ENTPD6O75354 484 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 VENTXO95231 258 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 OTX1P32242 354 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-211ENST00000471260 GATA4P43694 442 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 SLC6A9P48067 706 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 MMP16P51512 607 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 BLVRAP53004 296 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 HILS1P60008 231 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 LCN2P80188 198 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 CDK5Q00535 292 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 RAB40BQ12829 278 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 GK2Q14410 553 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-211ENST00000471260 ZMYND11Q15326 602 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 SSX1Q16384 188 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 CADM3Q8N126 398 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 PARP16Q8N5Y8 322 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 NANOGP1Q8N7R0 232 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 SEMA6DQ8NFY4 1073 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 OR2T33Q8NG76 320 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 TEX47Q8TBZ9 253 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 MAP6Q96JE9 813 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 CEP19Q96LK0 163 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 CENPOQ9BU64 300 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 TSSK6Q9BXA6 273 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 PLA2G12AQ9BZM1 189 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 FN3KQ9H479 309 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 FGF20Q9NP95 211 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-211ENST00000471260 DDX28Q9NUL7 540 aaKnown RBP11.35□□□□□ -0.59
HMGN1-211ENST00000471260 SSR3Q9UNL2 185 aa11.35□□□□□ -0.59
HMGN1-211ENST00000471260 M0R135 149 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 MLNRO43193 412 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 PRODHO43272 600 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 LCATP04180 440 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 CPEP16870 476 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 ADRA2CP18825 462 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 MYL12AP19105 171 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 GALP22466 123 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 FPR2P25090 351 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 ZFP36P26651 326 aaKnown RBP11.34□□□□□ -0.59
HMGN1-211ENST00000471260 GRK5P34947 590 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 SLC25A1P53007 311 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 PCK2Q16822 640 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 ESCO2Q56NI9 601 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 TEX30Q5JUR7 227 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 STEAP3Q658P3 488 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 DRAM2Q6UX65 266 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 PGAP1Q75T13 922 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 CYB561A3Q8NBI2 242 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 SLC37A3Q8NCC5 494 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 OR10AD1Q8NGE0 317 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 OR8D4Q8NGM9 314 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 AP3S1Q92572 193 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 ZNF799Q96GE5 643 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 OR5M11Q96RB7 305 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 JAM3Q9BX67 310 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 SUCNR1Q9BXA5 334 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 OPA3Q9H6K4 179 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 AMBNQ9NP70 447 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 ABCB10Q9NRK6 738 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 OPN4Q9UHM6 478 aa11.34□□□□□ -0.59
HMGN1-211ENST00000471260 TRIM77I1YAP6 450 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 TBX1O43435 398 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 ATP6V1G1O75348 118 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 FSHBP01225 129 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 IFNGP01579 166 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 WNT2P09544 360 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 HSMCR30P0CW71 290 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 CFL1P23528 166 aaKnown RBP11.33□□□□□ -0.6
HMGN1-211ENST00000471260 POU1F1P28069 291 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 PYCR1P32322 319 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 CD200P41217 278 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 EIF2B2P49770 351 aaKnown RBP11.33□□□□□ -0.6
HMGN1-211ENST00000471260 RORCP51449 518 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 WNT4P56705 351 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 EFNB1P98172 346 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 MRPL21Q7Z2W9 205 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms