RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 ZNF250P15622 560 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 CALML3P27482 149 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 FCGR2CP31995 323 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 CEACAM6P40199 344 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 PMELP40967 661 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 KIR2DS4P43632 304 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 RAB7AP51149 207 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 CRYBA4P53673 196 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 DLX6P56179 175 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 PEX3P56589 373 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 SEMG2Q02383 582 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 TGFBR3Q03167 851 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 ECH1Q13011 328 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 SKP2Q13309 424 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 TRIP13Q15645 432 aaPredicted RBP3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF506Q5JVG8 444 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 ACER2Q5QJU3 275 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 ATAD3CQ5T2N8 411 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 HBMQ6B0K9 141 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 RWDD4Q6NW29 188 aaKnown RBP3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 TRIM40Q6P9F5 258 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 WDR82Q6UXN9 313 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 GDPD3Q7L5L3 318 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 OR8U1Q8NH10 309 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 CRYGNQ8WXF5 182 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 CMTM7Q96FZ5 175 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 RCHY1Q96PM5 261 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 ALKBH3Q96Q83 286 aaPredicted RBP3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 OR2V2Q96R30 315 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF2Q9BSG1 426 aaPredicted RBP3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 PPDPFQ9H3Y8 114 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF385DQ9H6B1 395 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 NMUR1Q9HB89 426 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 MYOZ1Q9NP98 299 aaPredicted RBP3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 SEC14L4Q9UDX3 406 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 BTNL2Q9UIR0 455 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 CPQQ9Y646 472 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 FANCIQ9NVI1 1328 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 SNAPC4Q5SXM2 1469 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 NOTCH2Q04721 2471 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 A0A1W2PQ67 120 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 A0A1W2PRG6 482 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 FAM168BA1KXE4 195 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 VPS37CA5D8V6 355 aaPredicted RBP3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 SMIM9A6NGZ8 99 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 SMKR1H3BMG3 65 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 SMIM24O75264 130 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 FKBP6O75344 327 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 PTTG1O95997 202 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 HOXC4P09017 264 aaPredicted RBP3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 GTF2F2P13984 249 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 SDC1P18827 310 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 HTR1DP28221 377 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 ARL2P36404 184 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 PPOXP50336 477 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 TCL1AP56279 114 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 TAS2R39P59534 338 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF154Q13106 437 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 TOMM34Q15785 309 aaPredicted RBP3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 TTLL9Q3SXZ7 439 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 KIF24Q5T7B8 1368 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 FAM27D1Q5T7N8 215 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 CST9Q5W186 159 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 TMEM42Q69YG0 159 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 APOOLQ6UXV4 268 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 TMEM144Q7Z5S9 345 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 HORMAD1Q86X24 394 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 DHFR2Q86XF0 187 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 C10orf107Q8IVU9 208 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 CPNE9Q8IYJ1 553 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 PRR22Q8IZ63 422 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 SEC22AQ96IW7 307 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 RILPQ96NA2 401 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 FAM173AQ9BQD7 235 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 TIPINQ9BVW5 301 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 SLC19A3Q9BZV2 496 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 MAP1LC3AQ9H492 121 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF442Q9H7R0 627 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 UGT1A7Q9HAW7 530 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 MEPEQ9NQ76 525 aaPredicted RBP3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 FAM206AQ9NX38 181 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 GLTPQ9NZD2 209 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 FBXO5Q9UKT4 447 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 ALG5Q9Y673 324 aa3.57□□□□□ -1.84
PRPF40A-206ENST00000471167 COL22A1Q8NFW1 1626 aaPredicted RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 PCF11O94913 1555 aaKnown RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 NUP153P49790 1475 aaKnown RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 NUP160Q12769 1436 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF816-ZNF321PA0A0X1KG74 233 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF724A8MTY0 619 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF593O00488 134 aaPredicted RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 NME4O00746 187 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 NUPL2O15504 423 aaKnown RBP3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 FABP7O15540 132 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 SYNGR1O43759 233 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF253O75346 499 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 MED6O75586 246 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 ARG1P05089 322 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 CT45A6P0DMU7 189 aa3.56□□□□□ -1.84
PRPF40A-206ENST00000471167 CT45A5P0DMU8 189 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms