RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 THUMPD1Q9NXG2 353 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 FARSAQ9Y285 508 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 SNX24Q9Y343 169 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 MRPS18BQ9Y676 258 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 EIF3AQ14152 1382 aaKnown RBP3.08□□□□□ -1.92
COL11A1-208ENST00000470170 PLEKHH1Q9ULM0 1364 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 SMARCA2P51531 1590 aa3.08□□□□□ -1.92
COL11A1-208ENST00000470170 A0A0B4J2E0 115 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 A0A1B0GX12 115 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 A6NIZ1 184 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 USP27XA6NNY8 438 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 EFCAB9A8MZ26 197 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 PSMD12O00232 456 aaPredicted RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 KPNA3O00505 521 aaPredicted RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 CRXO43186 299 aaPredicted RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 STX10O60499 249 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 UGT1A9O60656 530 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 SHOX2O60902 331 aaPredicted RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 GATBO75879 557 aaKnown RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 CLIC3O95833 236 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 IFNA16P05015 189 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 FGF1P05230 155 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 BCHEP06276 602 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 PSMA1P25786 263 aaKnown RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 NTSP30990 170 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 DDOSTP39656 456 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 TFPI2P48307 235 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 HCAR3P49019 387 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 RPL8P62917 257 aaKnown RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 RPL19P84098 196 aaKnown RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 ST3GAL4Q11206 333 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 TFDP2Q14188 446 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 POU6F1Q14863 301 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 MPPED2Q15777 294 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 MEDAGQ5VYS4 303 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 MBOAT2Q6ZWT7 520 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 GDPD3Q7L5L3 318 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 PUSL1Q8N0Z8 303 aaKnown RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 CA13Q8N1Q1 262 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 WDR31Q8NA23 367 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 TMEM35BQ8NCS4 154 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 PXT1Q8NFP0 134 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 OR2AE1Q8NHA4 323 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 ACTRT1Q8TDG2 376 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 CASTOR1Q8WTX7 329 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 TLCD1Q96CP7 247 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 SMIM19Q96E16 107 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 ADTRPQ96IZ2 230 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 KCTD7Q96MP8 289 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 OR8B4Q96RC9 309 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 HBEGFQ99075 208 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 SORT1Q99523 831 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 PHB2Q99623 299 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 KCTD14Q9BQ13 255 aaPredicted RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 OR51B5Q9H339 312 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 OR51J1Q9H342 316 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 ASB7Q9H672 318 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 TMEM38AQ9H6F2 299 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 PTGES2Q9H7Z7 377 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 UBE2ZQ9H832 354 aaPredicted RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 TMEM27Q9HBJ8 222 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 ZDHHC4Q9NPG8 344 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 FBXO8Q9NRD0 319 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.07□□□□□ -1.92
COL11A1-208ENST00000470170 CMTM6Q9NX76 183 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 B3GNT2Q9NY97 397 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 SLC25A37Q9NYZ2 338 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 BTNL2Q9UIR0 455 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 PSG11Q9UQ72 335 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 CPDO75976 1380 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 MTUS2Q5JR59 1369 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 CEMIPQ8WUJ3 1361 aa3.07□□□□□ -1.92
COL11A1-208ENST00000470170 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.06□□□□□ -1.92
COL11A1-208ENST00000470170 A0A1B0GW55 424 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.06□□□□□ -1.92
COL11A1-208ENST00000470170 F5H768 121 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 ZNF593O00488 134 aaPredicted RBP3.06□□□□□ -1.92
COL11A1-208ENST00000470170 FCN1O00602 326 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 FGF16O43320 207 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 MPZL2O60487 215 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 SLC16A7O60669 478 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 MPZL1O95297 269 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 DUX4L2P0CJ85 424 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 DUX4L3P0CJ86 424 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 DUX4L5P0CJ88 424 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 DUX4L6P0CJ89 424 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 DUX4L7P0CJ90 424 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 LIMS3P0CW19 117 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 LIMS4P0CW20 117 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 CSNK2A2P19784 350 aaPredicted RBP3.06□□□□□ -1.92
COL11A1-208ENST00000470170 SLC2A5P22732 501 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 LOXP28300 417 aaPredicted RBP3.06□□□□□ -1.92
COL11A1-208ENST00000470170 RPA3P35244 121 aaPredicted RBP3.06□□□□□ -1.92
COL11A1-208ENST00000470170 SSTR5P35346 364 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 TAS2R39P59534 338 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 RND3P61587 244 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 PAFAH1B2P68402 229 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 SP4Q02446 784 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 TNFRSF9Q07011 255 aa3.06□□□□□ -1.92
COL11A1-208ENST00000470170 UNC119Q13432 240 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms