RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 NPPAP01160 153 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 ANXA2P07355 339 aaKnown RBP15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 SLC6A6P31641 620 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 FAM3AP98173 230 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 GFOD2Q3B7J2 385 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 TMEM95Q3KNT9 176 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 AGBL2Q5U5Z8 902 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 DCXRQ7Z4W1 244 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 CYB561A3Q8NBI2 242 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 ZNRF1Q8ND25 227 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 ANGPTL6Q8NI99 470 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 RPS4Y2Q8TD47 263 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 REEP6Q96HR9 211 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 HSH2DQ96JZ2 352 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 KCNJ15Q99712 375 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 MUC13Q9H3R2 512 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 GID8Q9NWU2 228 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 PITPNC1Q9UKF7 332 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 PCDHGB5Q9Y5G0 923 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 U3KQK5 164 aa15.31■□□□□ 0.04
NCKIPSD-209ENST00000470006 A0A1W2PPH5 198 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 OR6C68A6NDL8 312 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 OR2AT4A6NND4 320 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 OTX1P32242 354 aaPredicted RBP15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 PYCR1P32322 319 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 CD83Q01151 205 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 DCTN2Q13561 401 aaKnown RBP15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 KHDC1LQ5JSQ8 128 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 LHFPL4Q7Z7J7 247 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 CENPVQ7Z7K6 275 aaPredicted RBP15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 ZDHHC21Q8IVQ6 265 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 PROKR2Q8NFJ6 384 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 OR10Z1Q8NGY1 313 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 RTL8AQ9BWD3 113 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 CHID1Q9BWS9 393 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 NLKQ9UBE8 527 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 RHBDD3Q9Y3P4 386 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 ENPP4Q9Y6X5 453 aa15.3■□□□□ 0.04
NCKIPSD-209ENST00000470006 A0A0G2JND7 137 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 hCG_1809904A0A1W2PP81 198 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 A0A1W2PPE2 198 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 A0A1W2PR64 198 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 A0A1W2PRV1 198 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 SPARCP09486 303 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 GLRA1P23415 457 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 BLCAPP62952 87 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 IL5RAQ01344 420 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 KLHL22Q53GT1 634 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 SLC35F1Q5T1Q4 408 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 Q6ZS46 218 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 RNF144BQ7Z419 303 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 OR52J3Q8NH60 311 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 SPSB4Q96A44 273 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 SLAMF6Q96DU3 332 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 TLNRD1Q9H1K6 362 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 OR52D1Q9H346 318 aa15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 TSSC4Q9Y5U2 329 aaPredicted RBP15.29■□□□□ 0.04
NCKIPSD-209ENST00000470006 A0A1W2PRQ8 180 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 A6NDX4 124 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 C3orf84H3BNL1 204 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 F2RL2O00254 374 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 CXCR6O00574 342 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 ARPC3O15145 178 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 SYNGR1O43759 233 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 SERPINA1P01009 418 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 MXRA7P84157 204 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 SPIBQ01892 262 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 COL10A1Q03692 680 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 DGCR6Q14129 220 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 CBLL1Q75N03 491 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 FTMTQ8N4E7 242 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 STON2Q8WXE9 905 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 SGK3Q96BR1 496 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 GPR61Q9BZJ8 451 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 INPP5EQ9NRR6 644 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 C19orf12Q9NSK7 152 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 RAB21Q9UL25 225 aa15.28■□□□□ 0.04
NCKIPSD-209ENST00000470006 TRBV4-1A0A0J9YWV2 114 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 BBIP1A8MTZ0 92 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 VGLL3A8MV65 326 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 NHLRC4P0CG21 123 aaPredicted RBP15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 HSD11B1P28845 292 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 CX3CR1P49238 355 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 GSK3AP49840 483 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 EGFEM1PQ0D2K5 195 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 SEC23BQ15437 767 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 SSX2Q16385 188 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 COQ5Q5HYK3 327 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 ZNF782Q6ZMW2 699 aaPredicted RBP15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 DYNAPQ8N1N2 210 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 CSNK2A3Q8NEV1 391 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 OR51L1Q8NGJ5 315 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 RNF170Q96K19 258 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 SP140LQ9H930 580 aa15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 GMPR2Q9P2T1 348 aaKnown RBP15.27■□□□□ 0.04
NCKIPSD-209ENST00000470006 TMEM210A6NLX4 147 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 ZNF850A8MQ14 1090 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 ARG1P05089 322 aa15.26■□□□□ 0.03
NCKIPSD-209ENST00000470006 CHRM2P08172 466 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms