RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 CPT2P23786 658 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 MPGP29372 298 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 HTR5AP47898 357 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 FUT6P51993 359 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 TMEM50BP56557 158 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 ZP1P60852 638 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 UBE2MP61081 183 aaKnown RBP6.63□□□□□ -1.35
COL6A3-208ENST00000468792 RAP2BP61225 183 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 DHODHQ02127 395 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 SNAI3Q3KNW1 292 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 MOGAT2Q3SYC2 334 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 VAX1Q5SQQ9 334 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 CLVS2Q5SYC1 327 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 OR10K2Q6IF99 312 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 IGFL3Q6UXB1 125 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 LHFPL2Q6ZUX7 228 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 CHMP1BQ7LBR1 199 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.63□□□□□ -1.35
COL6A3-208ENST00000468792 TUSC5Q8IXB3 177 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 ZNF101Q8IZC7 436 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 ARRDC1Q8N5I2 433 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 ASCC1Q8N9N2 400 aaKnown RBP6.63□□□□□ -1.35
COL6A3-208ENST00000468792 ZSCAN4Q8NAM6 433 aaPredicted RBP6.63□□□□□ -1.35
COL6A3-208ENST00000468792 PRSS33Q8NF86 280 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 Q8NFD4 153 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 PXT1Q8NFP0 134 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 OR51S1Q8NGJ8 323 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 GRPEL2Q8TAA5 225 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 FNDC9Q8TBE3 224 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 PIGTQ969N2 578 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 ZNF775Q96BV0 537 aaPredicted RBP6.63□□□□□ -1.35
COL6A3-208ENST00000468792 RAB3CQ96E17 227 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 DMRTB1Q96MA1 342 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 GAL3ST1Q99999 423 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 GINS4Q9BRT9 223 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 TMPRSS13Q9BYE2 586 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 PRRG4Q9BZD6 226 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 ZNF436Q9C0F3 470 aaPredicted RBP6.63□□□□□ -1.35
COL6A3-208ENST00000468792 OR10A4Q9H209 315 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 KCNK15Q9H427 330 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 KLK13Q9UKR3 277 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 HSF4Q9ULV5 492 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 PLEKHA6Q9Y2H5 1048 aa6.63□□□□□ -1.35
COL6A3-208ENST00000468792 A0A0A6YYD4 124 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 ZNF816-ZNF321PA0A0X1KG74 233 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 UBE2QL1A1L167 161 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 C5orf63A6NC05 138 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 TMEM235A6NFC5 223 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 A8MV72 311 aaPredicted RBP6.62□□□□□ -1.35
COL6A3-208ENST00000468792 PROB1E7EW31 1015 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 H3BUI4 141 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 AQP7O14520 342 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 FABP7O15540 132 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 SSNA1O43805 119 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 LCATP04180 440 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 FAHP16930 419 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 HLA-GP17693 338 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 CXCL3P19876 107 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 ANOS1P23352 680 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 ACKR3P25106 362 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 EIF2S3P41091 472 aaKnown RBP6.62□□□□□ -1.35
COL6A3-208ENST00000468792 RAD52P43351 418 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 OR3A4PP47883 348 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 OR3A2P47893 321 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 RBP2P50120 134 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 NKX2-5P52952 324 aaPredicted RBP6.62□□□□□ -1.35
COL6A3-208ENST00000468792 ARF1P84077 181 aaKnown RBP6.62□□□□□ -1.35
COL6A3-208ENST00000468792 FAM3AP98173 230 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 HGFACQ04756 655 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 GUSBP1Q15486 140 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 TGIF1Q15583 401 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 RNASE10Q5GAN6 216 aaKnown RBP6.62□□□□□ -1.35
COL6A3-208ENST00000468792 PABPC1L2AQ5JQF8 200 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 FBXW9Q5XUX1 488 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 LAMTOR1Q6IAA8 161 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 LPCAT3Q6P1A2 487 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 TMEM53Q6P2H8 277 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 FJX1Q86VR8 437 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 MCEMP1Q8IX19 187 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 SAXO1Q8IYX7 474 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 BPIFB2Q8N4F0 458 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 ACBD4Q8NC06 268 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 TMEM104Q8NE00 496 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 OR4D10Q8NGI6 311 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 CAPSLQ8WWF8 208 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 ST8SIA4Q92187 359 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 GMPPAQ96IJ6 420 aaPredicted RBP6.62□□□□□ -1.35
COL6A3-208ENST00000468792 GPER1Q99527 375 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 S100A13Q99584 98 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 SELENOIQ9C0D9 397 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 DLL4Q9NR61 685 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 B3GNT2Q9NY97 397 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 NKIRAS2Q9NYR9 191 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 FLVCR2Q9UPI3 526 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 KCNK7Q9Y2U2 307 aa6.62□□□□□ -1.35
COL6A3-208ENST00000468792 PTPRBP23467 1997 aa6.61□□□□□ -1.35
COL6A3-208ENST00000468792 FAM90A10PA6NDY2 464 aa6.61□□□□□ -1.35
COL6A3-208ENST00000468792 FAM90A18PA6NE21 464 aa6.61□□□□□ -1.35
COL6A3-208ENST00000468792 FAM90A16PA6NEW6 464 aa6.61□□□□□ -1.35
COL6A3-208ENST00000468792 FAM90A20PA6NIJ5 464 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms