RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 DCTN6O00399 190 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 GIPP09681 153 aaPredicted RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 CISD3P0C7P0 127 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 GLI4P10075 376 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 COL9A1P20849 921 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 DIO1P49895 249 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 TRAT1Q6PIZ9 186 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 ADPRHL1Q8NDY3 354 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 PCNPQ8WW12 178 aaKnown RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 CCL17Q92583 94 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 RBPMSQ93062 196 aaKnown RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 UGT2A1Q9Y4X1 527 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 LMO7DNF2Z398 122 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 CRXO43186 299 aaPredicted RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 TOX4O94842 621 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 OR2F2O95006 317 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 DUS4LO95620 317 aaKnown RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 TMIGD3P0DMS9 266 aaPredicted RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 G0S2P27469 103 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 HRH1P35367 487 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 OR2F1Q13607 317 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 IL11RAQ14626 422 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 RNF151Q2KHN1 245 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 SOWAHCQ53LP3 525 aaPredicted RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 PXDC1Q5TGL8 231 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 RPUSD3Q6P087 351 aaKnown RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 GUSBP11Q6P575 273 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 SPNS3Q6ZMD2 512 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 VASH2Q86V25 355 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 PTRH1Q86Y79 214 aaKnown RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 ZNF485Q8NCK3 441 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 SLC25A46Q96AG3 418 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 PLEKHA2Q9HB19 425 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 ZNF71Q9NQZ8 489 aaPredicted RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 TAAR3PQ9P1P4 343 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 OR2A25A4D2G3 310 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 TMPRSS11DO60235 418 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 CD3EP07766 207 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 AREGP15514 252 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 SSPNQ14714 243 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 CTU2Q2VPK5 515 aaKnown RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 TMEM97Q5BJF2 176 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 ACSM5Q6NUN0 579 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 OR4C3Q8NH37 302 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 LSM2Q9Y333 95 aaKnown RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 KCNMB2Q9Y691 235 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 RPL12P30050 165 aaKnown RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 OR3A4PP47883 348 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 RAB7AP51149 207 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 SUMO1P63165 101 aaKnown RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 TP53I13Q8NBR0 393 aaPredicted RBP7.83□□□□□ -1.16
HPS4-209ENST00000466781 CMBLQ96DG6 245 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 PTDSS2Q9BVG9 487 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 PIGMQ9H3S5 423 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 A4GNTQ9UNA3 340 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 MICAL3Q7RTP6 2002 aa7.83□□□□□ -1.16
HPS4-209ENST00000466781 ALG1L2C9J202 215 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 HRASP01112 189 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 CEACAM5P06731 702 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 NME1P15531 152 aaKnown RBP7.82□□□□□ -1.16
HPS4-209ENST00000466781 POLR2IP36954 125 aaKnown RBP7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR8B3Q8NGG8 313 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR5M8Q8NGP6 311 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR2A1Q8NGT9 310 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 RAB1CQ92928 201 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR8B4Q96RC9 309 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR8B2Q96RD0 313 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 FBXO8Q9NRD0 319 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 IL5P05113 134 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 FGF2P09038 288 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR5H8P0DN80 308 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 KLF3P57682 345 aaPredicted RBP7.82□□□□□ -1.16
HPS4-209ENST00000466781 DGAT2L6Q6ZPD8 337 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR5D13Q8NGL4 314 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OR5H6Q8NGV6 325 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 GABRG3Q99928 467 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OCEL1Q9H607 264 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 A0A1W2PR80 420 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 J3QR89 54 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 SULT1A3P0DMM9 295 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 SULT1A4P0DMN0 295 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 MGMTP16455 207 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 PCBP4P57723 403 aaKnown RBP7.82□□□□□ -1.16
HPS4-209ENST00000466781 BTG1P62324 171 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 SNRPNP63162 240 aaKnown RBP7.82□□□□□ -1.16
HPS4-209ENST00000466781 PMP22Q01453 160 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 FABP9Q0Z7S8 132 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 HES3Q5TGS1 186 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 PELI3Q8N2H9 469 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 CELF2-AS1Q8N7Q2 184 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 LILRB4Q8NHJ6 448 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 GATA6Q92908 595 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 TM4SF19Q96DZ7 209 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 DUS3LQ96G46 650 aaKnown RBP7.82□□□□□ -1.16
HPS4-209ENST00000466781 TCFL5Q9UL49 500 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 AQP8O94778 261 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 LY86O95711 162 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 GNG3P63215 75 aa7.82□□□□□ -1.16
HPS4-209ENST00000466781 OXA1LQ15070 435 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms