RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 SVOPQ8N4V2 548 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 PNLDC1Q8NA58 520 aaKnown RBP12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 LRRC75AQ8NAA5 344 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 OR4C13Q8NGP0 309 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 OR2T6Q8NHC8 308 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 SLC25A44Q96H78 314 aaPredicted RBP12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 ZNF582Q96NG8 517 aaPredicted RBP12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 TECTBQ96PL2 329 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 COPS4Q9BT78 406 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 KCNN2Q9H2S1 579 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 ELOVL3Q9HB03 270 aa12.09□□□□□ -0.47
HMGXB4-206ENST00000466438 TEX13CA0A0J9YWL9 993 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 PTGES3LE9PB15 166 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 C11orf98E9PRG8 122 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 RENP00797 406 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 PGA4P0DJD7 388 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 PGA3P0DJD8 388 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 SMIM18P0DKX4 95 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 VSIG10L2P0DP72 767 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 ATP6V1B1P15313 513 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 ZNF32P17041 273 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 KITLGP21583 273 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 PSMB10P40306 273 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 ZNF84P51523 738 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 ERVK-25P63136 954 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 SLC35A2P78381 396 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 TMED1Q13445 227 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 DCTN2Q13561 401 aaKnown RBP12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 KRR1Q13601 381 aaKnown RBP12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 SMN1Q16637 294 aaKnown RBP12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 ZNF181Q2M3W8 571 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 SLC35F1Q5T1Q4 408 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 ZBTB37Q5TC79 503 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 LCN1P1Q5VSP4 162 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 AHSA2Q719I0 299 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 SLC35D2Q76EJ3 337 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 FAM122BQ7Z309 247 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 PDZD9Q8IXQ8 264 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 C1orf87Q8N0U7 546 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 STX19Q8N4C7 294 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 OTULINQ96BN8 352 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 TXNIPQ9H3M7 391 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 DUSP21Q9H596 190 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 TAS2R5Q9NYW4 299 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 AASSQ9UDR5 926 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 PSORS1C1Q9UIG5 152 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 ADAM18Q9Y3Q7 739 aa12.08□□□□□ -0.48
HMGXB4-206ENST00000466438 A6NIZ1 184 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 ADARB2-AS1A8MUL3 147 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 DBTP11182 482 aaKnown RBP12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 HIST1H1CP16403 213 aaKnown RBP12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 HTR1FP30939 366 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 RAP1BP61224 184 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 RPL27P61353 136 aaKnown RBP12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 RAP1AP62834 184 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 ZNF91Q05481 1191 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 CRMP1Q14194 572 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 AADACL4Q5VUY2 407 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 PLBD1Q6P4A8 553 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 PRSS48Q7RTY5 328 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 CPOQ8IVL8 374 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 SLC37A3Q8NCC5 494 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 SDR9C7Q8NEX9 313 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 AKR7LQ8NHP1 331 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 PPP1R35Q8TAP8 253 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 NPRL2Q8WTW4 380 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 MEGF10Q96KG7 1140 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 C4orf45Q96LM5 186 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 CCDC90BQ9GZT6 254 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 RANBP3Q9H6Z4 567 aaPredicted RBP12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 FKBP14Q9NWM8 211 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 GAR1Q9NY12 217 aaKnown RBP12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 WARS2Q9UGM6 360 aaKnown RBP12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 DNAH7Q8WXX0 4024 aa12.07□□□□□ -0.48
HMGXB4-206ENST00000466438 TRIM64CA6NLI5 447 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 SLC2A10O95528 541 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 RPL5P46777 297 aaKnown RBP12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 RPS7P62081 194 aaKnown RBP12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 PSG4Q00888 419 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 RAB40BQ12829 278 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 POU4F2Q12837 409 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 MELKQ14680 651 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 SLC35D3Q5M8T2 416 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 FAM201AQ5SY85 155 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 ARL9Q6T311 187 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 NPEPL1Q8NDH3 523 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 OR4K13Q8NH42 304 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 MUC7Q8TAX7 377 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 GGHQ92820 318 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 MCHR2Q969V1 340 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 RNF166Q96A37 237 aaPredicted RBP12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 RASD2Q96D21 266 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 Q96M85 177 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 CNTD2Q9H8S5 307 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 SIAEQ9HAT2 523 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 HYDINQ4G0P3 5121 aa12.06□□□□□ -0.48
HMGXB4-206ENST00000466438 FADS2O95864 444 aaKnown RBP12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 IGHG1P01857 330 aa12.05□□□□□ -0.48
HMGXB4-206ENST00000466438 CDK1P06493 297 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms