RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ZNF485Q8NCK3 441 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 OR5AK2Q8NH90 309 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 RPS4Y2Q8TD47 263 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 PIGCQ92535 297 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 CCL17Q92583 94 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 RAB1CQ92928 201 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 ITPKCQ96DU7 683 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 TECTBQ96PL2 329 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 SOX7Q9BT81 388 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 RTL8AQ9BWD3 113 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 MND1Q9BWT6 205 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 YTHDF1Q9BYJ9 559 aaKnown RBP14.33□□□□□ -0.12
USP39-211ENST00000465282 PLEKHA1Q9HB21 404 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 TMEM106BQ9NUM4 274 aa14.33□□□□□ -0.12
USP39-211ENST00000465282 YLPM1P49750 1951 aaKnown RBP14.33□□□□□ -0.12
USP39-211ENST00000465282 ZNF469Q96JG9 3925 aaPredicted RBP14.32□□□□□ -0.12
USP39-211ENST00000465282 MED13LQ71F56 2210 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 LOC107986453A0A1B0GWG9 222 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 TRIM64A6NGJ6 449 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 TRIM64BA6NI03 449 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 ZNF850A8MQ14 1090 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 OGG1O15527 345 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 FSTL3O95633 263 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 NRASP01111 189 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 USF1P22415 310 aaPredicted RBP14.32□□□□□ -0.12
USP39-211ENST00000465282 WNT4P56705 351 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 ODF4Q2M2E3 257 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 CEACAM21Q3KPI0 293 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 SPRNQ5BIV9 151 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 C1orf87Q8N0U7 546 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 OR5A2Q8NGI9 324 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 Q8TCH9 128 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 GATAD2BQ8WXI9 593 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 OR5P3Q8WZ94 311 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 C18orf12Q96KH6 178 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 COX4I2Q96KJ9 171 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 BPESC1Q9GZL8 116 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 FN3KRPQ9HA64 309 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 CR1P17927 2039 aa14.32□□□□□ -0.12
USP39-211ENST00000465282 LOC100289279A0A1B0GTE1 492 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 OR5B21A6NL26 309 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 RNF223E7ERA6 249 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 E9PI62 339 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 H7C1Q1 480 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 PPIHO43447 177 aaKnown RBP14.31□□□□□ -0.12
USP39-211ENST00000465282 RGS10O43665 173 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 MRPS14O60783 128 aaKnown RBP14.31□□□□□ -0.12
USP39-211ENST00000465282 ZFPL1O95159 310 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 SERPINA3P01011 423 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 IRF2P14316 349 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 FAHP16930 419 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 BDH1Q02338 343 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 CDK5R1Q15078 307 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 FAM76BQ5HYJ3 339 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 PRSS48Q7RTY5 328 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 OR11L1Q8NGX0 322 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 PP6455Q8WZ26 134 aa14.31□□□□□ -0.12
USP39-211ENST00000465282 PAK1IP1Q9NWT1 392 aaPredicted RBP14.31□□□□□ -0.12
USP39-211ENST00000465282 GATBO75879 557 aaKnown RBP14.3□□□□□ -0.12
USP39-211ENST00000465282 CD1AP06126 327 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 GTF2A1P52655 376 aaPredicted RBP14.3□□□□□ -0.12
USP39-211ENST00000465282 CHN2P52757 468 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 GABARAPL2P60520 117 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 GNG3P63215 75 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 ACSM1Q08AH1 577 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 MOGAT3Q86VF5 341 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 RDH10Q8IZV5 341 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 SMIM19Q96E16 107 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 RNF170Q96K19 258 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 UBAP1Q9NZ09 502 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 NPTNQ9Y639 398 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 CACNG2Q9Y698 323 aa14.3□□□□□ -0.12
USP39-211ENST00000465282 ACANP16112 2415 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 A0A096LNT2 108 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 ANKRD61A6NGH8 418 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 TMEM178BH3BS89 294 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 HEXAP06865 529 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 GRPP07492 148 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 CFHR2P36980 270 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 IRF3Q14653 427 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 PLCXD3Q63HM9 321 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 DMKNQ6E0U4 476 aaPredicted RBP14.29□□□□□ -0.12
USP39-211ENST00000465282 MOB3CQ70IA8 216 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 UTS2BQ765I0 119 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 OR1M1Q8NGA1 313 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 DVL3Q92997 716 aaPredicted RBP14.29□□□□□ -0.12
USP39-211ENST00000465282 PDCD1LG2Q9BQ51 273 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 CHST5Q9GZS9 411 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 TLNRD1Q9H1K6 362 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 ERVK-18Q9QC07 812 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 RNF7Q9UBF6 113 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 F8P00451 2351 aa14.29□□□□□ -0.12
USP39-211ENST00000465282 ZANQ9Y493 2812 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 PLPP2O43688 288 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 INHBBP09529 407 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 ZNF20P17024 532 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 CPT2P23786 658 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 EEF1B2P24534 225 aaKnown RBP14.28□□□□□ -0.12
USP39-211ENST00000465282 ZNF154Q13106 437 aa14.28□□□□□ -0.12
USP39-211ENST00000465282 SPHARQ15513 63 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms