RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 DCTN2Q13561 401 aaKnown RBP11.99□□□□□ -0.49
HDAC6-214ENST00000465269 SPATS1Q496A3 300 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 CYBRD1Q53TN4 286 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 LDLRAD2Q5SZI1 272 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 WDR82Q6UXN9 313 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 C18orf65Q6ZTR6 163 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 CENPVQ7Z7K6 275 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-214ENST00000465269 NRMQ8IXM6 262 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 FAM185AQ8N0U4 392 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 GJC3Q8NFK1 279 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 OR56B2PQ8NGI1 322 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 MCUR1Q96AQ8 359 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 CCDC124Q96CT7 223 aaKnown RBP11.99□□□□□ -0.49
HDAC6-214ENST00000465269 ZNF570Q96NI8 536 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 PITX2Q99697 317 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 NUAK2Q9H093 628 aa11.99□□□□□ -0.49
HDAC6-214ENST00000465269 SLC25A10Q9UBX3 287 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-214ENST00000465269 NKX6-3A6NJ46 265 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 DCTN6O00399 190 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 ARPC2O15144 300 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 ZNF682O95780 498 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 IFNA14P01570 189 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 SELENOWP63302 87 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 KRR1Q13601 381 aaKnown RBP11.98□□□□□ -0.49
HDAC6-214ENST00000465269 BLMHQ13867 455 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 TRIM25Q14258 630 aaKnown RBP11.98□□□□□ -0.49
HDAC6-214ENST00000465269 GLYATL3Q5SZD4 288 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 PGM2L1Q6PCE3 622 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 CYP2R1Q6VVX0 501 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 PTCHD4Q6ZW05 846 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 FAM122BQ7Z309 247 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 OAFQ86UD1 273 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 DTX3Q8N9I9 347 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 Q8NFD4 153 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 DMRTB1Q96MA1 342 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 RCHY1Q96PM5 261 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 ZNF649Q9BS31 505 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 SLC22A4Q9H015 551 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 MAGEL2Q9UJ55 1249 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 N6AMT1Q9Y5N5 214 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 SNX13Q9Y5W8 968 aa11.98□□□□□ -0.49
HDAC6-214ENST00000465269 SH2D7A6NKC9 451 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-214ENST00000465269 EFCAB9A8MZ26 197 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 BHLHE40O14503 412 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 SOCS2O14508 198 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 CDC42EP2O14613 210 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 ZFPL1O95159 310 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 CLIC3O95833 236 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 SDHAP31040 664 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 GPR4P46093 362 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 IL5RAQ01344 420 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 KCNMB1Q16558 191 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 CBLL1Q75N03 491 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 ASRGL1Q7L266 308 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 DPY19L4Q7Z388 723 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 VTCN1Q7Z7D3 282 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 OR5D13Q8NGL4 314 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 RASSF5Q8WWW0 418 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 NSMCE2Q96MF7 247 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 GORASP2Q9H8Y8 452 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 C19orf12Q9NSK7 152 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 DCAF13Q9NV06 445 aaKnown RBP11.97□□□□□ -0.49
HDAC6-214ENST00000465269 ACTR3BQ9P1U1 418 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 RHCGQ9UBD6 479 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 NOP16Q9Y3C1 178 aaKnown RBP11.97□□□□□ -0.49
HDAC6-214ENST00000465269 V9GYQ6 96 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 ALMS1Q8TCU4 4167 aa11.97□□□□□ -0.49
HDAC6-214ENST00000465269 CDIPTO14735 213 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 CD14P08571 375 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 YAP1P46937 504 aaKnown RBP11.96□□□□□ -0.49
HDAC6-214ENST00000465269 LUMP51884 338 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-214ENST00000465269 LGALS4P56470 323 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 ZSCAN26Q16670 478 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 SLC18B1Q6NT16 456 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 ZNF782Q6ZMW2 699 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-214ENST00000465269 ZNF788Q6ZQV5 615 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 FKBP9P1Q75LS8 142 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 DHFR2Q86XF0 187 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 OR1M1Q8NGA1 313 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 LZICQ8WZA0 190 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 DUX3Q96PT4 197 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 ATF6BQ99941 703 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 GPR61Q9BZJ8 451 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 RNPEPL1Q9HAU8 725 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 PNRC2Q9NPJ4 139 aaKnown RBP11.96□□□□□ -0.49
HDAC6-214ENST00000465269 HAO2Q9NYQ3 351 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 MRPL15Q9P015 296 aaKnown RBP11.96□□□□□ -0.49
HDAC6-214ENST00000465269 BAG5Q9UL15 447 aa11.96□□□□□ -0.49
HDAC6-214ENST00000465269 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-214ENST00000465269 VGLL3A8MV65 326 aa11.95□□□□□ -0.5
HDAC6-214ENST00000465269 IFNW1P05000 195 aa11.95□□□□□ -0.5
HDAC6-214ENST00000465269 SLC2A1P11166 492 aa11.95□□□□□ -0.5
HDAC6-214ENST00000465269 ATP6V1B2P21281 511 aa11.95□□□□□ -0.5
HDAC6-214ENST00000465269 SSX2Q16385 188 aa11.95□□□□□ -0.5
HDAC6-214ENST00000465269 ATPAF1Q5TC12 328 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-214ENST00000465269 TBPL2Q6SJ96 375 aa11.95□□□□□ -0.5
HDAC6-214ENST00000465269 TSEN54Q7Z6J9 526 aaKnown RBP11.95□□□□□ -0.5
HDAC6-214ENST00000465269 C11orf42Q8N5U0 333 aa11.95□□□□□ -0.5
HDAC6-214ENST00000465269 FAM86B1Q8N7N1 296 aa11.95□□□□□ -0.5
HDAC6-214ENST00000465269 ZNRF1Q8ND25 227 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms