RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 WNT9BO14905 357 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 LIMS3P0CW19 117 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 LIMS4P0CW20 117 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 PIPP12273 146 aaPredicted RBP14.94□□□□□ -0.02
COL7A1-205ENST00000465238 LMO4P61968 165 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 MZT1Q08AG7 82 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 SCGB2A2Q13296 93 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 ODF4Q2M2E3 257 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 SPRNQ5BIV9 151 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 TMPRSS11AQ6ZMR5 421 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 STX19Q8N4C7 294 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 SEMA6DQ8NFY4 1073 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 OR8S1Q8NH09 359 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 OR51F2Q8NH61 342 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 CCL17Q92583 94 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 PELI1Q96FA3 418 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 MEGF10Q96KG7 1140 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 ZNF649Q9BS31 505 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 PAPOLGQ9BWT3 736 aaKnown RBP14.94□□□□□ -0.02
COL7A1-205ENST00000465238 ISG20L2Q9H9L3 353 aaKnown RBP14.94□□□□□ -0.02
COL7A1-205ENST00000465238 SCN3BQ9NY72 215 aa14.94□□□□□ -0.02
COL7A1-205ENST00000465238 A0A0A6YYJ9 748 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 A0A1B0GVI7 797 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 IGLV3-1P01715 115 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 ACKR3P25106 362 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 ETV1P50549 477 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 GBX2P52951 348 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-205ENST00000465238 SLC3A1Q07837 685 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 RIPPLY1Q0D2K3 151 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 MRPL28Q13084 256 aaKnown RBP14.93□□□□□ -0.02
COL7A1-205ENST00000465238 WDR38Q5JTN6 314 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 FDX2Q6P4F2 183 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 AHSA2Q719I0 299 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 DOK3Q7L591 496 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 PRSS35Q8N3Z0 413 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 KLHL36Q8N4N3 616 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 CELF2-AS1Q8N7Q2 184 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 OR2G2Q8NGZ5 317 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 HAVCR2Q8TDQ0 301 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 PIGCQ92535 297 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 CNBD2Q96M20 576 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 OCEL1Q9H607 264 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 METTL17Q9H7H0 456 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-205ENST00000465238 LPAR2Q9HBW0 351 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 C14orf119Q9NWQ9 140 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 PPP1R3CQ9UQK1 317 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 CAB39Q9Y376 341 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-205ENST00000465238 RHBDD3Q9Y3P4 386 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 MPC1Q9Y5U8 109 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 CACNG2Q9Y698 323 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 TANC2Q9HCD6 1990 aa14.93□□□□□ -0.02
COL7A1-205ENST00000465238 TRAV20A0A0B4J274 112 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 ZNF816-ZNF321PA0A0X1KG74 233 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 A0A1B0GTI1 187 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 ANXA2P2A6NMY6 339 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 CLDN25C9JDP6 229 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 DHRS3O75911 302 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 CST4P01036 141 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 CD200P41217 278 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 CCR9P51686 369 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 DVL3Q92997 716 aaPredicted RBP14.92□□□□□ -0.02
COL7A1-205ENST00000465238 HIST1H2AAQ96QV6 131 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 ZNF184Q99676 751 aaPredicted RBP14.92□□□□□ -0.02
COL7A1-205ENST00000465238 Q9H521 79 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 ABCB9Q9NP78 766 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 PIGLQ9Y2B2 252 aa14.92□□□□□ -0.02
COL7A1-205ENST00000465238 WNK2Q9Y3S1 2297 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 TENM1Q9UKZ4 2725 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 IGHV3-64DA0A0J9YX35 117 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 ZNF850A8MQ14 1090 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 PTGES3LE9PB15 166 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 IFNL4K9M1U5 179 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 SLC1A7O00341 560 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 SYT7O43581 403 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 UBCP0CG48 685 aaKnown RBP14.91□□□□□ -0.02
COL7A1-205ENST00000465238 KIR3DL2P43630 455 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 MVKQ03426 396 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 PRDX4Q13162 271 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 MAB21L1Q13394 359 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 ALKBH1Q13686 389 aaKnown RBP14.91□□□□□ -0.02
COL7A1-205ENST00000465238 ZBTB37Q5TC79 503 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 TMEM244Q5VVB8 128 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 PEG10Q86TG7 708 aaKnown RBP14.91□□□□□ -0.02
COL7A1-205ENST00000465238 MOGAT3Q86VF5 341 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 TEX29Q8N6K0 151 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 PLPP7Q8NBV4 271 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 CCDC54Q8NEL0 328 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 RAB1CQ92928 201 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 MYDGFQ969H8 173 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 RNF166Q96A37 237 aaPredicted RBP14.91□□□□□ -0.02
COL7A1-205ENST00000465238 TIMD4Q96H15 378 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 MICU1Q9BPX6 476 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 GCM1Q9NP62 436 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 TMEM106BQ9NUM4 274 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 FRRS1LQ9P0K9 344 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 ENPP5Q9UJA9 477 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 TPRKBQ9Y3C4 175 aa14.91□□□□□ -0.02
COL7A1-205ENST00000465238 ZNF12P17014 697 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 CCL1P22362 96 aa14.9□□□□□ -0.02
COL7A1-205ENST00000465238 NANOS3P60323 173 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms