RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 GCM1Q9NP62 436 aa10.04□□□□□ -0.8
APTX-213ENST00000465003 CGGBP1Q9UFW8 167 aaPredicted RBP10.04□□□□□ -0.8
APTX-213ENST00000465003 PPP1R3CQ9UQK1 317 aa10.04□□□□□ -0.8
APTX-213ENST00000465003 CAB39Q9Y376 341 aaPredicted RBP10.04□□□□□ -0.8
APTX-213ENST00000465003 IGHV4-61A0A0C4DH41 118 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 IRGMA1A4Y4 181 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 ANKRD61A6NGH8 418 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 PPIHO43447 177 aaKnown RBP10.03□□□□□ -0.8
APTX-213ENST00000465003 DENRO43583 198 aaKnown RBP10.03□□□□□ -0.8
APTX-213ENST00000465003 TNFSF4P23510 183 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 CFL1P23528 166 aaKnown RBP10.03□□□□□ -0.8
APTX-213ENST00000465003 IL2RGP31785 369 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 GNALP38405 381 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 MAP2K3P46734 347 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 PDLIM4P50479 330 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 GPM6AP51674 278 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 ARPC4P59998 168 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 TMPRSS11AQ6ZMR5 421 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 KCTD8Q6ZWB6 473 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 KCTD20Q7Z5Y7 419 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 BOLLQ8N9W6 283 aaKnown RBP10.03□□□□□ -0.8
APTX-213ENST00000465003 RDH5Q92781 318 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 ITPKCQ96DU7 683 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 ADAT3Q96EY9 351 aaPredicted RBP10.03□□□□□ -0.8
APTX-213ENST00000465003 NKX3-1Q99801 234 aaPredicted RBP10.03□□□□□ -0.8
APTX-213ENST00000465003 OPA3Q9H6K4 179 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 METTL17Q9H7H0 456 aaPredicted RBP10.03□□□□□ -0.8
APTX-213ENST00000465003 PLEKHA1Q9HB21 404 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 ZFHX3Q15911 3703 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 ZNF816-ZNF321PA0A0X1KG74 233 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 A6NLC8 198 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 INMTO95050 263 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 CD55P08174 381 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 ADH4P08319 380 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 CRYBB2P43320 205 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 SOX2P48431 317 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 RIPPLY1Q0D2K3 151 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 CDK5R1Q15078 307 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 MED22Q15528 200 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 PLCXD3Q63HM9 321 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 MOB3CQ70IA8 216 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 MRPL48Q96GC5 212 aaKnown RBP10.03□□□□□ -0.8
APTX-213ENST00000465003 EGLN1Q9GZT9 426 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 Q9H521 79 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 NKIRAS2Q9NYR9 191 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 IL19Q9UHD0 177 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 TPRKBQ9Y3C4 175 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 V9GYS6 101 aa10.03□□□□□ -0.8
APTX-213ENST00000465003 LOC390937A0A1W2PQ73 354 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 ISPDA4D126 451 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 ACOD1A6NK06 481 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 RGS10O43665 173 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 CCDC159P0C7I6 412 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 UBCP0CG48 685 aaKnown RBP10.02□□□□□ -0.81
APTX-213ENST00000465003 HSMCR30P0CW71 290 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 DDOSTP39656 456 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 WNT4P56705 351 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 ZNF154Q13106 437 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 MED21Q13503 144 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 RIN1Q13671 783 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 INSL4Q14641 139 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 HFEQ30201 348 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 PRSS57Q6UWY2 283 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 Q71RC1 249 aaPredicted RBP10.02□□□□□ -0.81
APTX-213ENST00000465003 DOK3Q7L591 496 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 RNF144BQ7Z419 303 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 ZDHHC23Q8IYP9 409 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 NANOGP1Q8N7R0 232 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 PLPP7Q8NBV4 271 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 CSNK2A3Q8NEV1 391 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 OR13C3Q8NGS6 347 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 OR52N1Q8NH53 320 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 OR5AK2Q8NH90 309 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 RPL3LQ92901 407 aaKnown RBP10.02□□□□□ -0.81
APTX-213ENST00000465003 MYDGFQ969H8 173 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 FGGYQ96C11 551 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 SEH1LQ96EE3 360 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 PIMREGQ9BSJ6 248 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 REG4Q9BYZ8 158 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 DUSP21Q9H596 190 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 CHODLQ9H9P2 273 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 BABAM2Q9NXR7 383 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 ERGIC3Q9Y282 383 aa10.02□□□□□ -0.81
APTX-213ENST00000465003 TEP1Q99973 2627 aaKnown RBP10.02□□□□□ -0.81
APTX-213ENST00000465003 hCG_1807616A0A1W2PRN6 198 aa10.01□□□□□ -0.81
APTX-213ENST00000465003 MAGEA13PA6NCF6 341 aa10.01□□□□□ -0.81
APTX-213ENST00000465003 GMDSO60547 372 aa10.01□□□□□ -0.81
APTX-213ENST00000465003 MTRF1O75570 445 aaKnown RBP10.01□□□□□ -0.81
APTX-213ENST00000465003 PLATP00750 562 aa10.01□□□□□ -0.81
APTX-213ENST00000465003 NRASP01111 189 aa10.01□□□□□ -0.81
APTX-213ENST00000465003 CELP19835 753 aa10.01□□□□□ -0.81
APTX-213ENST00000465003 ACHEP22303 614 aa10.01□□□□□ -0.81
APTX-213ENST00000465003 CCL1P22362 96 aa10.01□□□□□ -0.81
APTX-213ENST00000465003 GPR6P46095 362 aaPredicted RBP10.01□□□□□ -0.81
APTX-213ENST00000465003 SRP9P49458 86 aaKnown RBP10.01□□□□□ -0.81
APTX-213ENST00000465003 UBE2V2Q15819 145 aa10.01□□□□□ -0.81
APTX-213ENST00000465003 SFRP4Q6FHJ7 346 aaPredicted RBP10.01□□□□□ -0.81
APTX-213ENST00000465003 FDX2Q6P4F2 183 aa10.01□□□□□ -0.81
APTX-213ENST00000465003 SPNS3Q6ZMD2 512 aa10.01□□□□□ -0.81
APTX-213ENST00000465003 TSEN15Q8WW01 171 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms