RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 C11orf53Q8IXP5 236 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 ZDHHC23Q8IYP9 409 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 SEMA6DQ8NFY4 1073 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 OR51E1Q8TCB6 317 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 TRUB1Q8WWH5 349 aaKnown RBP13.54□□□□□ -0.24
COL1A1-202ENST00000463440 OR5P3Q8WZ94 311 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 RNF170Q96K19 258 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 FAM71F1Q96KD3 344 aaPredicted RBP13.54□□□□□ -0.24
COL1A1-202ENST00000463440 TECTBQ96PL2 329 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 C19orf24Q9BVV8 132 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 SUCNR1Q9BXA5 334 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 GPR84Q9NQS5 396 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 R4GMQ9 66 aa13.54□□□□□ -0.24
COL1A1-202ENST00000463440 MTRF1O75570 445 aaKnown RBP13.53□□□□□ -0.24
COL1A1-202ENST00000463440 KRT8P05787 483 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 OR2T7P0C7T2 308 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 CFHR2P36980 270 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 PAX2Q02962 417 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 MFGE8Q08431 387 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-202ENST00000463440 RIPPLY1Q0D2K3 151 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 MICBQ29980 383 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 BCL2L15Q5TBC7 163 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 TEX36Q5VZQ5 186 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 CD276Q5ZPR3 534 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 WDR82Q6UXN9 313 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 ZNF841Q6ZN19 808 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 USP43Q70EL4 1123 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 BPIFB2Q8N4F0 458 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 CBR4Q8N4T8 237 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 OR2T27Q8NH04 317 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 EME1Q96AY2 570 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 HRASLS5Q96KN8 279 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 TBX5Q99593 518 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 C9orf16Q9BUW7 83 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 TLNRD1Q9H1K6 362 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 S100A14Q9HCY8 104 aa13.53□□□□□ -0.24
COL1A1-202ENST00000463440 MRM2Q9UI43 246 aaKnown RBP13.53□□□□□ -0.24
COL1A1-202ENST00000463440 KIR2DS1A0A191URI9 304 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 CDIPTO14735 213 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 TNFRSF13BO14836 293 aaPredicted RBP13.52□□□□□ -0.25
COL1A1-202ENST00000463440 MAGEB4O15481 346 aaPredicted RBP13.52□□□□□ -0.25
COL1A1-202ENST00000463440 SRSF10O75494 262 aaKnown RBP13.52□□□□□ -0.25
COL1A1-202ENST00000463440 IGLV3-1P01715 115 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 GYPAP02724 150 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 TTRP02766 147 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 PPIAL4GP0DN37 164 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 MUC1P15941 1255 aaPredicted RBP13.52□□□□□ -0.25
COL1A1-202ENST00000463440 EGR1P18146 543 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 ZIK1Q3SY52 487 aaPredicted RBP13.52□□□□□ -0.25
COL1A1-202ENST00000463440 ZBTB37Q5TC79 503 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 KRT74Q7RTS7 529 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 FAM90A1Q86YD7 464 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 YIPF7Q8N8F6 280 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 OR10H4Q8NGA5 316 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 PPP1R14AQ96A00 147 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 JMJD8Q96S16 334 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 NUDT16L1Q9BRJ7 211 aaKnown RBP13.52□□□□□ -0.25
COL1A1-202ENST00000463440 CTSZQ9UBR2 303 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 ENPP5Q9UJA9 477 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 OR52A1Q9UKL2 312 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 NUP50Q9UKX7 468 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.52□□□□□ -0.25
COL1A1-202ENST00000463440 SNX5Q9Y5X3 404 aa13.52□□□□□ -0.25
COL1A1-202ENST00000463440 DNHD1Q96M86 4753 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 IGHV3OR15-7A0A075B7D8 119 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 A0A1W2PQL4 384 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-202ENST00000463440 SRRM5B3KS81 715 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 ENSAO43768 121 aaKnown RBP13.51□□□□□ -0.25
COL1A1-202ENST00000463440 DHRS3O75911 302 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 RGS9O75916 674 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-202ENST00000463440 VENTXO95231 258 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 APOL3O95236 402 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 GNG3P63215 75 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 CEACAM21Q3KPI0 293 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 FAM76BQ5HYJ3 339 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 PLEKHG7Q6ZR37 379 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 SSX6Q7RTT6 188 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 ELMOD2Q8IZ81 293 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 SCCPDHQ8NBX0 429 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 OR10Z1Q8NGY1 313 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 ZFAND2BQ8WV99 257 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 HPSE2Q8WWQ2 592 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 RPL3LQ92901 407 aaKnown RBP13.51□□□□□ -0.25
COL1A1-202ENST00000463440 DACT3Q96B18 629 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-202ENST00000463440 SLC6A7Q99884 636 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 KAAG1Q9UBP8 84 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 PIGLQ9Y2B2 252 aa13.51□□□□□ -0.25
COL1A1-202ENST00000463440 METTL15A6NJ78 407 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 TMPRSS2O15393 492 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 SULT1C4O75897 302 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 RPP14O95059 124 aaKnown RBP13.5□□□□□ -0.25
COL1A1-202ENST00000463440 FAHP16930 419 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 MTNR1AP48039 350 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 GPM6AP51674 278 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 HILS1P60008 231 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 SNRPGP62308 76 aaKnown RBP13.5□□□□□ -0.25
COL1A1-202ENST00000463440 CEP78Q5JTW2 689 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 SLC25A30Q5SVS4 291 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 MEDAGQ5VYS4 303 aa13.5□□□□□ -0.25
COL1A1-202ENST00000463440 MOB3CQ70IA8 216 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms