RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 PDZD9Q8IXQ8 264 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 PIP4P2Q8N4L2 257 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 OR56B2PQ8NGI1 322 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 ST8SIA4Q92187 359 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 EME1Q96AY2 570 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 DCLRE1BQ9H816 532 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 ORC6Q9Y5N6 252 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 MUC1P15941 1255 aaPredicted RBP16.29■□□□□ 0.2
VARS-221ENST00000463184 DDOSTP39656 456 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 POU4F2Q12837 409 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 CRMP1Q14194 572 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 MICBQ29980 383 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 TMEM236Q5W0B7 351 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 METAP1DQ6UB28 335 aaPredicted RBP16.29■□□□□ 0.2
VARS-221ENST00000463184 CYB561A3Q8NBI2 242 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 LY6G5BQ8NDX9 201 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 PROKR2Q8NFJ6 384 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 OR2T4Q8NH00 348 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 COPS4Q9BT78 406 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 GABARAPL3Q9BY60 117 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 RNPEPL1Q9HAU8 725 aa16.29■□□□□ 0.2
VARS-221ENST00000463184 IGHV3OR15-7A0A075B7D8 119 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 C5orf63A6NC05 138 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 BTBD17A6NE02 478 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 ZAR1LA6NP61 321 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 XRCC2O43543 280 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 FBP1P09467 338 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 ANOS1P23352 680 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 PYCR1P32322 319 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 RPS27P42677 84 aaKnown RBP16.28■□□□□ 0.2
VARS-221ENST00000463184 SLC25A1P53007 311 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 GUCA2AQ02747 115 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 DHRS7BQ6IAN0 325 aaPredicted RBP16.28■□□□□ 0.2
VARS-221ENST00000463184 DCXRQ7Z4W1 244 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 OR8S1Q8NH09 359 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 SPSB4Q96A44 273 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 KCNJ15Q99712 375 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 SLC29A1Q99808 456 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 PRRG3Q9BZD7 231 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 NMNAT2Q9BZQ4 307 aa16.28■□□□□ 0.2
VARS-221ENST00000463184 TVP23AA6NH52 213 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 ANKRD30BLA7E2S9 258 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 H0YHG0 523 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 GPR37O15354 613 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 TSPAN9O75954 239 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 TSPAN15O95858 294 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 PAICSP22234 425 aaKnown RBP16.27■□□□□ 0.2
VARS-221ENST00000463184 EPHA2P29317 976 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 PRKXP51817 358 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 TAF13Q15543 124 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 SNAPC1Q16533 368 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 C2orf68Q2NKX9 166 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 SLX4IPQ5VYV7 408 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 SLC36A1Q7Z2H8 476 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 C11orf53Q8IXP5 236 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 CMTM4Q8IZR5 234 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 RIBC2Q9H4K1 309 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 TVP23BQ9NYZ1 205 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 ZNRD1Q9P1U0 126 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 ONECUT1Q9UBC0 465 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 VPREB3Q9UKI3 123 aa16.27■□□□□ 0.2
VARS-221ENST00000463184 EEF1B2P24534 225 aaKnown RBP16.26■□□□□ 0.19
VARS-221ENST00000463184 POLR2IP36954 125 aaKnown RBP16.26■□□□□ 0.19
VARS-221ENST00000463184 TGFBR2P37173 567 aa16.26■□□□□ 0.19
VARS-221ENST00000463184 PCK2Q16822 640 aa16.26■□□□□ 0.19
VARS-221ENST00000463184 OR9Q1Q8NGQ5 310 aa16.26■□□□□ 0.19
VARS-221ENST00000463184 FAM110DQ8TAY7 271 aaPredicted RBP16.26■□□□□ 0.19
VARS-221ENST00000463184 LRRC29Q8WV35 223 aa16.26■□□□□ 0.19
VARS-221ENST00000463184 C12orf43Q96C57 262 aaKnown RBP16.26■□□□□ 0.19
VARS-221ENST00000463184 CCL13Q99616 98 aa16.26■□□□□ 0.19
VARS-221ENST00000463184 C8orf4Q9NR00 106 aa16.26■□□□□ 0.19
VARS-221ENST00000463184 CENPMQ9NSP4 180 aa16.26■□□□□ 0.19
VARS-221ENST00000463184 N6AMT1Q9Y5N5 214 aa16.26■□□□□ 0.19
VARS-221ENST00000463184 PRR23D1E9PI22 279 aaPredicted RBP16.25■□□□□ 0.19
VARS-221ENST00000463184 PRR23D2P0DMB1 279 aaPredicted RBP16.25■□□□□ 0.19
VARS-221ENST00000463184 SLC2A1P11166 492 aa16.25■□□□□ 0.19
VARS-221ENST00000463184 SPI1P17947 270 aa16.25■□□□□ 0.19
VARS-221ENST00000463184 WDR38Q5JTN6 314 aa16.25■□□□□ 0.19
VARS-221ENST00000463184 C12orf73Q69YU5 71 aa16.25■□□□□ 0.19
VARS-221ENST00000463184 DPY19L4Q7Z388 723 aa16.25■□□□□ 0.19
VARS-221ENST00000463184 C1QL4Q86Z23 238 aa16.25■□□□□ 0.19
VARS-221ENST00000463184 FGFRL1Q8N441 504 aa16.25■□□□□ 0.19
VARS-221ENST00000463184 OR1M1Q8NGA1 313 aa16.25■□□□□ 0.19
VARS-221ENST00000463184 ZNRF4Q8WWF5 429 aa16.25■□□□□ 0.19
VARS-221ENST00000463184 SLAMF6Q96DU3 332 aa16.25■□□□□ 0.19
VARS-221ENST00000463184 COMMD3-BMI1R4GMX3 469 aa16.25■□□□□ 0.19
VARS-221ENST00000463184 ZNF816-ZNF321PA0A0X1KG74 233 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 A0A1B0GW55 424 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 FAM183AA6NL82 134 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 ZNF878C9JN71 531 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 CASQ2O14958 399 aaPredicted RBP16.24■□□□□ 0.19
VARS-221ENST00000463184 NDUFB3O43676 98 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 DUX4L2P0CJ85 424 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 DUX4L3P0CJ86 424 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 DUX4L4P0CJ87 422 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 DUX4L5P0CJ88 424 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 DUX4L6P0CJ89 424 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 DUX4L7P0CJ90 424 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 PSKH1P11801 424 aa16.24■□□□□ 0.19
VARS-221ENST00000463184 FMO3P31513 532 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms