RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SMIM19Q96E16 107 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 GMPPAQ96IJ6 420 aaPredicted RBP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 ALKBH3Q96Q83 286 aaPredicted RBP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 COQ7Q99807 217 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF416Q9BWM5 594 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 SIAEQ9HAT2 523 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 SLC7A10Q9NS82 523 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 CENPMQ9NSP4 180 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 TXNL4BQ9NX01 149 aaKnown RBP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 GSTK1Q9Y2Q3 226 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 LRP12Q9Y561 859 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 LHFPL6Q9Y693 200 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF407Q9C0G0 2248 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 GCN1Q92616 2671 aaKnown RBP6.35□□□□□ -1.39
UBE4B-204ENST00000462658 BAHCC1Q9P281 2608 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 TENM4Q6N022 2769 aa6.35□□□□□ -1.39
UBE4B-204ENST00000462658 CD8B2A6NJW9 211 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF587BE7ETH6 402 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 RPL36A-HNRNPH2H7BZ11 118 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 GABRPO00591 440 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 RER1O15258 196 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 GPRIN2O60269 458 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 SS18L1O75177 396 aaPredicted RBP6.34□□□□□ -1.39
UBE4B-204ENST00000462658 SERPINA3P01011 423 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 TPOP07202 933 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 CST2P09228 141 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 GABRA1P14867 456 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 GALP22466 123 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 AGTR1P30556 359 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 FGF9P31371 208 aaPredicted RBP6.34□□□□□ -1.39
UBE4B-204ENST00000462658 OPRL1P41146 370 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 SERPINB10P48595 397 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 TUBA1BP68363 451 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 ENDOGQ14249 297 aaKnown RBP6.34□□□□□ -1.39
UBE4B-204ENST00000462658 TAF13Q15543 124 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 STK11Q15831 433 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 DGUOKQ16854 277 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 ACSF3Q4G176 576 aaPredicted RBP6.34□□□□□ -1.39
UBE4B-204ENST00000462658 NSUN5P2Q63ZY6 315 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 C22orf42Q6IC83 251 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 OR7E24Q6IFN5 339 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 ZNF544Q6NX49 715 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 TMEM91Q6ZNR0 172 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 CFAP77Q6ZQR2 320 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 TUBA1AQ71U36 451 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 UBE2J2Q8N2K1 259 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 SLC22A24Q8N4F4 322 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 GJC3Q8NFK1 279 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 KBTBD8Q8NFY9 601 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 OR10S1Q8NGN2 331 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 OR2G2Q8NGZ5 317 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 DYNC2LI1Q8TCX1 351 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 RPS4Y2Q8TD47 263 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 PGLYRP3Q96LB9 341 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 KCTD7Q96MP8 289 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 TSC22D3Q99576 134 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 PDCD1LG2Q9BQ51 273 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 DCSTAMPQ9H295 470 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 TMEM38BQ9NVV0 291 aa6.34□□□□□ -1.39
UBE4B-204ENST00000462658 DNAJC13O75165 2243 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF878C9JN71 531 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 WDR1O75083 606 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 CDRT1O95170 752 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 FARS2O95363 451 aaKnown RBP6.33□□□□□ -1.4
UBE4B-204ENST00000462658 IFNA2P01563 188 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 HOXD4P09016 255 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-204ENST00000462658 B4GALT1P15291 398 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 ABOP16442 354 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 LMO1P25800 156 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 DCTDP32321 178 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 PTGER4P35408 488 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 KIR3DL2P43630 455 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 OR3A2P47893 321 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 CCR9P51686 369 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 TDGF1P3P51864 188 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 HIST1H3AP68431 136 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 ARF1P84077 181 aaKnown RBP6.33□□□□□ -1.4
UBE4B-204ENST00000462658 INSL4Q14641 139 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 GUSBP1Q15486 140 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF829Q3KNS6 432 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-204ENST00000462658 ACSM3Q53FZ2 586 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 HIST2H3PS2Q5TEC6 136 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 C9orf135Q5VTT2 229 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 FBXW9Q5XUX1 488 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 OR2A2Q6IF42 318 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 KLHL24Q6TFL4 600 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 PAMR1Q6UXH9 720 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 HIST2H3AQ71DI3 136 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 SLC16A14Q7RTX9 510 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 ABHD12BQ7Z5M8 362 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-204ENST00000462658 CEACAM19Q7Z692 300 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 FAM185AQ8N0U4 392 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 GCNT2Q8N0V5 402 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 PRSS35Q8N3Z0 413 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 ZNF676Q8N7Q3 588 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 C9orf106Q8NAJ2 232 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 OR13C5Q8NGS8 318 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 OR5AK2Q8NH90 309 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 FAM57AQ8TBR7 257 aa6.33□□□□□ -1.4
UBE4B-204ENST00000462658 HSD17B8Q92506 261 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms