RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 V9GYS6 101 aa5.42□□□□□ -1.54
SF3B1-206ENST00000462613 PDZD2O15018 2839 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 OR4C45A6NMZ5 311 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 H3BSH0 61 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 MLNRO43193 412 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 NCR1O76036 304 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 LY6HO94772 140 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 ZFPL1O95159 310 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 TNFAIP8O95379 198 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 IGLV3-1P01715 115 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 GRPP07492 148 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 HSMCR30P0CW71 290 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 CELP19835 753 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 USF1P22415 310 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-206ENST00000462613 PRKACBP22694 351 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 ACKR3P25106 362 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 PSMA1P25786 263 aaKnown RBP5.41□□□□□ -1.54
SF3B1-206ENST00000462613 GIFP27352 417 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 GATA4P43694 442 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 CHN2P52757 468 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 PPP3R1P63098 170 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 MVKQ03426 396 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 TRAM1Q15629 374 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 TBCEQ15813 527 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF181Q2M3W8 571 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 YIF1BQ5BJH7 314 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 CEP78Q5JTW2 689 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 Q6ZR03 302 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 MOGAT3Q86VF5 341 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF573Q86YE8 665 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 SERPINA12Q8IW75 414 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 PRSS35Q8N3Z0 413 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 SPICQ8N5J4 248 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 MS4A15Q8N5U1 240 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 WFDC11Q8NEX6 87 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 OR5A2Q8NGI9 324 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 OR5D14Q8NGL3 314 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 OR14K1Q8NGZ2 314 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF671Q8TAW3 534 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 C10orf105Q8TEF2 133 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 FCGR1BQ92637 280 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 GTF3AQ92664 365 aaKnown RBP5.41□□□□□ -1.54
SF3B1-206ENST00000462613 UFD1Q92890 307 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 BORCS8Q96FH0 119 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 LYZL4Q96KX0 146 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 GAL3ST1Q99999 423 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 PDCD1LG2Q9BQ51 273 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 CHST5Q9GZS9 411 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 DUSP21Q9H596 190 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 GCM1Q9NP62 436 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF275Q9NSD4 429 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-206ENST00000462613 TMEM106BQ9NUM4 274 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 UFSP2Q9NUQ7 469 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 ERVK-18Q9QC07 812 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 CLEC2DQ9UHP7 191 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 LRCH1Q9Y2L9 728 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 POLDIP2Q9Y2S7 368 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 RHBDD3Q9Y3P4 386 aa5.41□□□□□ -1.54
SF3B1-206ENST00000462613 WNK2Q9Y3S1 2297 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 TRAV38-1A0A0B4J264 116 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 A0A1B0GTI1 187 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 PNMA8CA0A1B0GUJ8 204 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 A0A1B0GWJ7 208 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 LRP5LA4QPB2 252 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 C5orf63A6NC05 138 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF732B4DXR9 585 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 H0YL77 283 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 OGG1O15527 345 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 PLPP2O43688 288 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 LILRA1O75019 489 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 MT-ND2P03891 347 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 HCKP08631 526 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 CD99P14209 185 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 FOSL1P15407 271 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 COL8A2P25067 703 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 MDH2P40926 338 aaKnown RBP5.4□□□□□ -1.54
SF3B1-206ENST00000462613 NR4A2P43354 598 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 RANBP1P43487 201 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 KIR3DL2P43630 455 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 RBP2P50120 134 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 GPM6AP51674 278 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 FUT6P51993 359 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 ATP1B3P54709 279 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 NANOS3P60323 173 aaKnown RBP5.4□□□□□ -1.54
SF3B1-206ENST00000462613 BTG1P62324 171 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 ACSM1Q08AH1 577 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 TNK1Q13470 666 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 GPR50Q13585 617 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 Q499Y3 187 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 KCTD21Q4G0X4 260 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 TMEM255AQ5JRV8 349 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 LAIR2Q6ISS4 152 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 FIP1L1Q6UN15 594 aaKnown RBP5.4□□□□□ -1.54
SF3B1-206ENST00000462613 Q6ZSR3 168 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 LHFPL2Q6ZUX7 228 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 NLRC3Q7RTR2 1065 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF367Q7RTV3 350 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 RDH10Q8IZV5 341 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 PNLDC1Q8NA58 520 aaKnown RBP5.4□□□□□ -1.54
SF3B1-206ENST00000462613 OR1M1Q8NGA1 313 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms