RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 Q8TCH9 128 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 TMIGD2Q96BF3 282 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 PGAM5Q96HS1 289 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 ADAT1Q9BUB4 502 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 SSBP3Q9BWW4 388 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 FGF23Q9GZV9 251 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 MS4A7Q9GZW8 240 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 PRDM13Q9H4Q3 707 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 BRD7Q9NPI1 651 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 FAM206AQ9NX38 181 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 MRPL15Q9P015 296 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR5V1Q9UGF6 321 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 MRM2Q9UI43 246 aaKnown RBP6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 PPP1R3CQ9UQK1 317 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 N6AMT1Q9Y5N5 214 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 PLXNB1O43157 2135 aa6.59□□□□□ -1.35
CDC42BPA-210ENST00000462553 GGT3PA6NGU5 568 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 ANKRD65E5RJM6 399 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 J3QRE1 110 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 MAGEB4O15481 346 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 HOXA3O43365 443 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 FAM20BO75063 409 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 ENTPD6O75354 484 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF205O95201 554 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 CYB5R3P00387 301 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 APOC1P02654 83 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 RPS2P15880 293 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 DCTDP32321 178 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 SRP9P49458 86 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 SNRPGP62308 76 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR8G1Q15617 311 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 MPPED2Q15777 294 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF181Q2M3W8 571 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 DEFB112Q30KQ8 113 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 FAM201AQ5SY85 155 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF684Q5T5D7 378 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF322Q6U7Q0 402 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 BRD3OSQ6XYD6 125 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 PLEKHG7Q6ZR37 379 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 KRT77Q7Z794 578 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 KLBQ86Z14 1044 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF679Q8IYX0 411 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 MUC20Q8N307 709 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR52H1Q8NGJ2 320 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR51G2Q8NGK0 314 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 SPRYD4Q8WW59 207 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 CITED1Q99966 193 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 APOL4Q9BPW4 351 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 TMEM246Q9BRR3 403 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 C9orf16Q9BUW7 83 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 OR10A2Q9H208 303 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 NIPAL2Q9H841 368 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 TMEM165Q9HC07 324 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 CLN6Q9NWW5 311 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 AASSQ9UDR5 926 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 WARS2Q9UGM6 360 aaKnown RBP6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 TMEM14AQ9Y6G1 99 aa6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 TET2Q6N021 2002 aaPredicted RBP6.58□□□□□ -1.36
CDC42BPA-210ENST00000462553 DNAH9Q9NYC9 4486 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 A0A0U1RQV5 110 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 ACOD1A6NK06 481 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 SRRM5B3KS81 715 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 C22orf46C9J442 243 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF670-ZNF695F2Z2N8 137 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 IFNL4K9M1U5 179 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 GMDSO60547 372 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF254O75437 659 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 TTRP02766 147 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 DDOSTP39656 456 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 MTNR1AP48039 350 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 RIDAP52758 137 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 RAG2P55895 527 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 KRTAP10-3P60369 221 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 CDC42P60953 191 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 CXCR4P61073 352 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 ISL1P61371 349 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF85Q03923 595 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZSCAN26Q16670 478 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 GFOD2Q3B7J2 385 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZNF404Q494X3 552 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 SLC25A30Q5SVS4 291 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 C16orf87Q6PH81 154 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 KCTD18Q6PI47 426 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 ZBTB49Q6ZSB9 765 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 Q6ZSR3 168 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 KRT74Q7RTS7 529 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 C11orf53Q8IXP5 236 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 C10orf67Q8IYJ2 551 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 ENTHD1Q8IYW4 607 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 HPSE2Q8WWQ2 592 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 RAB40AQ8WXH6 277 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 ASB17Q8WXJ9 295 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 PPP1R14AQ96A00 147 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 ITPKCQ96DU7 683 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 MNTQ99583 582 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 TBX5Q99593 518 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 PBOV1Q9GZY1 135 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 SLC22A4Q9H015 551 aa6.57□□□□□ -1.36
CDC42BPA-210ENST00000462553 RGCCQ9H4X1 137 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms