RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ZNF695Q8IW36 515 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 TRIML2Q8N7C3 387 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 OR13G1Q8NGZ3 307 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 OR52P1PQ8NH57 321 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 RTN4IP1Q8WWV3 396 aaPredicted RBP1.82□□□□□ -2.12
HDAC6-212ENST00000461608 BAALCQ8WXS3 180 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 KIAA1143Q96AT1 154 aaPredicted RBP1.82□□□□□ -2.12
HDAC6-212ENST00000461608 LRRC39Q96DD0 335 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 C19orf60Q96EN9 201 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 MSANTD3Q96H12 275 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 SNF8Q96H20 258 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 UBE2E2Q96LR5 201 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 RBBP8Q99708 897 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 RNF5Q99942 180 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 GGTLC1Q9BX51 225 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 NAA50Q9GZZ1 169 aaKnown RBP1.82□□□□□ -2.12
HDAC6-212ENST00000461608 HAUS4Q9H6D7 363 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 ZNF442Q9H7R0 627 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 SLC38A10Q9HBR0 1119 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 C8orf17Q9NRJ1 99 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 KLF12Q9Y4X4 402 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 TSSC4Q9Y5U2 329 aaPredicted RBP1.82□□□□□ -2.12
HDAC6-212ENST00000461608 TNIKQ9UKE5 1360 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 PLA2R1Q13018 1463 aa1.82□□□□□ -2.12
HDAC6-212ENST00000461608 GPATCH8Q9UKJ3 1502 aaKnown RBP1.81□□□□□ -2.12
HDAC6-212ENST00000461608 A0A0A6YYD5 115 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 IGHV2OR16-5A0A0B4J2B6 119 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 IGHV1-3A0A0C4DH29 117 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 LRCOL1A6NCL2 159 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 ERICH4A6NGS2 130 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 MANBAO00462 879 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 TCAPO15273 167 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 SCO1O75880 301 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 RCBTB2O95199 551 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 MPZL1O95297 269 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 CYB5R3P00387 301 aaPredicted RBP1.81□□□□□ -2.12
HDAC6-212ENST00000461608 TRBV12-3P01733 135 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 TPM1P09493 284 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 OR5AL1P0C617 328 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 LOXP28300 417 aaPredicted RBP1.81□□□□□ -2.12
HDAC6-212ENST00000461608 PRLHRP49683 370 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 ETV1P50549 477 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 PAFAH1B2P68402 229 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 PITPNAQ00169 270 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 INCA1Q0VD86 236 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 MAPRE2Q15555 327 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 TOMM34Q15785 309 aaPredicted RBP1.81□□□□□ -2.12
HDAC6-212ENST00000461608 CDNFQ49AH0 187 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 IDNKQ5T6J7 187 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 SAXO2Q658L1 398 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 DUPD1Q68J44 220 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 UNQ9165/PRO28630Q6UXU0 137 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 ASCL4Q6XD76 172 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 Q6ZSR6 202 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 NEGR1Q7Z3B1 354 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 ST13P4Q8IZP2 240 aaPredicted RBP1.81□□□□□ -2.12
HDAC6-212ENST00000461608 SLC7A5P1Q8MH63 180 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 RNF10Q8N5U6 811 aaKnown RBP1.81□□□□□ -2.12
HDAC6-212ENST00000461608 DRAM1Q8N682 238 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 SPANXA2-OT1Q8N9U9 137 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 NECAP1Q8NC96 275 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 OR4A15Q8NGL6 344 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 OR6N2Q8NGY6 317 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 ING5Q8WYH8 240 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 DYNLL2Q96FJ2 89 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 CENPNQ96H22 339 aaPredicted RBP1.81□□□□□ -2.12
HDAC6-212ENST00000461608 RNF170Q96K19 258 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 OR4K3Q96R72 315 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 C1orf50Q9BV19 199 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 OSBPL11Q9BXB4 747 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 API5Q9BZZ5 524 aaKnown RBP1.81□□□□□ -2.12
HDAC6-212ENST00000461608 HEBP1Q9NRV9 189 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 GGA2Q9UJY4 613 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 SIGLEC7Q9Y286 467 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 CBY1Q9Y3M2 126 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 LRRC42Q9Y546 428 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 UBIAD1Q9Y5Z9 338 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 SLIT3O75094 1523 aa1.81□□□□□ -2.12
HDAC6-212ENST00000461608 AHDC1Q5TGY3 1603 aaPredicted RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 IGLV3-12A0A075B6K2 115 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 LOC100653049A0A140TA62 436 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 GMDSO60547 372 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 TRAPPC6AO75865 159 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 CCNKO75909 580 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 KRT34O76011 436 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 VAPBO95292 243 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 HLA-DQB1P01920 261 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 APOA1P02647 267 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 PRB2P02812 416 aaPredicted RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 SNRPAP09012 282 aaKnown RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 ZNF806P0C7X5 589 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 CCNOP22674 350 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 GNRHRP30968 328 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 DEKP35659 375 aaKnown RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 PSMB2P49721 201 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 LINC00315P59091 139 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 LAMTOR4Q0VGL1 99 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 CDC20Q12834 499 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 SNRNP35Q16560 246 aaKnown RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 PRSS8Q16651 343 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms