RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 SPP1P10451 314 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 IKZF1Q13422 519 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 MIDNQ504T8 468 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 FAM209BQ5JX69 171 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 OR51F2Q8NH61 342 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 IL1F10Q8WWZ1 152 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 ISOC2Q96AB3 205 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 MRPL38Q96DV4 380 aaKnown RBP12.86□□□□□ -0.35
NCL-207ENST00000461347 RRNAD1Q96FB5 475 aaKnown RBP12.86□□□□□ -0.35
NCL-207ENST00000461347 PRRX2Q99811 253 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 FBXL17Q9UF56 701 aa12.86□□□□□ -0.35
NCL-207ENST00000461347 A0A1W2PP11 408 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 M0R135 149 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 TK1P04183 234 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 SLC25A4P12235 298 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 NQO2P16083 231 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 CD27P26842 260 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 ASCL1P50553 236 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 KISS1Q15726 138 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 RPUSD3Q6P087 351 aaKnown RBP12.85□□□□□ -0.35
NCL-207ENST00000461347 LINC00469Q8N7U9 141 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 SEMA6DQ8NFY4 1073 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 SLC26A10Q8NG04 563 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 OR2G3Q8NGZ4 309 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 ZNF799Q96GE5 643 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 MSR1P21757 451 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 ZBTB25P24278 435 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 CCR5P51681 352 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 PRSS12P56730 875 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 LIN37Q96GY3 246 aaPredicted RBP12.85□□□□□ -0.35
NCL-207ENST00000461347 CRISPLD2Q9H0B8 497 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 TLNRD1Q9H1K6 362 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 PTRH2Q9Y3E5 179 aaKnown RBP12.85□□□□□ -0.35
NCL-207ENST00000461347 IGHV3-15A0A0B4J1V0 119 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 TGFBR3LH3BV60 316 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 CDC14BO60729 498 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 OR2J2O76002 312 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 ZNF205O95201 554 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 DAOP14920 347 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 IL11P20809 199 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 TAGLN2P37802 199 aaKnown RBP12.85□□□□□ -0.35
NCL-207ENST00000461347 MEOX2P50222 304 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 Q7L0L9 218 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 C6orf201Q7Z4U5 140 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 PLPP5Q8NEB5 264 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 LPAR3Q9UBY5 353 aa12.85□□□□□ -0.35
NCL-207ENST00000461347 OR6C76A6NM76 312 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 RAB27BO00194 218 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 ABHD16AO95870 558 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 BCKDHBP21953 392 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 FCARP24071 287 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 ALDH3B1P43353 468 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 SRYQ05066 204 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 HAGHQ16775 308 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 PDZD11Q5EBL8 140 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 FAHD2BQ6P2I3 314 aaPredicted RBP12.84□□□□□ -0.35
NCL-207ENST00000461347 SLC22A25Q6T423 547 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 LILRB2Q8N423 598 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 ZNF784Q8NCA9 323 aaPredicted RBP12.84□□□□□ -0.35
NCL-207ENST00000461347 OR1L3Q8NH93 324 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 SFT2D1Q8WV19 159 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 HAS2Q92819 552 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 FAHD2AQ96GK7 314 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 PAPOLGQ9BWT3 736 aaKnown RBP12.84□□□□□ -0.35
NCL-207ENST00000461347 NELFAQ9H3P2 528 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 HEATR5AQ86XA9 2040 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 SVILO95425 2214 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 LILRA5A6NI73 299 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 MSTNO14793 375 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 CST4P01036 141 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 PTAFRP25105 342 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 ZNF133P52736 654 aaPredicted RBP12.84□□□□□ -0.35
NCL-207ENST00000461347 S100A12P80511 92 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 C20orf196Q8IYI0 205 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 RPS4Y2Q8TD47 263 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 SLC25A31Q9H0C2 315 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 TPRP12270 2363 aaKnown RBP12.84□□□□□ -0.35
NCL-207ENST00000461347 E5RGE8 158 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 OR2C1O95371 312 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 P04436 131 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 IFNA4P05014 189 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 NPBWR1P48145 328 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 RAB5CP51148 216 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 DCDP81605 110 aaKnown RBP12.84□□□□□ -0.35
NCL-207ENST00000461347 GUK1Q16774 197 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 PNLIPRP3Q17RR3 467 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 TMEM104Q8NE00 496 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 OR51B6Q9H340 312 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 NSG2Q9Y328 171 aa12.84□□□□□ -0.35
NCL-207ENST00000461347 ANKUB1A6NFN9 424 aa12.83□□□□□ -0.36
NCL-207ENST00000461347 EFSO43281 561 aa12.83□□□□□ -0.36
NCL-207ENST00000461347 S100A8P05109 93 aa12.83□□□□□ -0.36
NCL-207ENST00000461347 MSX1P28360 303 aa12.83□□□□□ -0.36
NCL-207ENST00000461347 PDCD1Q15116 288 aa12.83□□□□□ -0.36
NCL-207ENST00000461347 PPP1R3BQ86XI6 285 aa12.83□□□□□ -0.36
NCL-207ENST00000461347 LDLRAD3Q86YD5 345 aa12.83□□□□□ -0.36
NCL-207ENST00000461347 ZNF561Q8N587 486 aa12.83□□□□□ -0.36
NCL-207ENST00000461347 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
NCL-207ENST00000461347 GAS2L1Q99501 681 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms