RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 OR2T27Q8NH04 317 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 LRRC29Q8WV35 223 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 TRUB1Q8WWH5 349 aaKnown RBP12.86□□□□□ -0.35
VARS-219ENST00000461328 HRASLS5Q96KN8 279 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 TECTBQ96PL2 329 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 MBOAT4Q96T53 435 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 MRI1Q9BV20 369 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 CLN8Q9UBY8 286 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 MRM2Q9UI43 246 aaKnown RBP12.86□□□□□ -0.35
VARS-219ENST00000461328 OR52A1Q9UKL2 312 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.86□□□□□ -0.35
VARS-219ENST00000461328 POLR3KQ9Y2Y1 108 aaPredicted RBP12.86□□□□□ -0.35
VARS-219ENST00000461328 A0A1W2PQL4 384 aaPredicted RBP12.85□□□□□ -0.35
VARS-219ENST00000461328 SNTNA6NMZ2 147 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 TRAPPC2LH3BP13 241 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 ENTPD6O75354 484 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 MTRF1O75570 445 aaKnown RBP12.85□□□□□ -0.35
VARS-219ENST00000461328 FSTL3O95633 263 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 ZNF12P17014 697 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 ZSCAN26Q16670 478 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 ARMCX4Q5H9R4 360 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 BTNL3Q6UXE8 466 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 WDR86Q86TI4 376 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 GALNT4Q8N4A0 578 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 BPIFB2Q8N4F0 458 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 UBE2FQ969M7 185 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 ITPKCQ96DU7 683 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 RNF170Q96K19 258 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 PIGLQ9Y2B2 252 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 INSIG2Q9Y5U4 225 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 SNX5Q9Y5X3 404 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 AUP1Q9Y679 476 aa12.85□□□□□ -0.35
VARS-219ENST00000461328 ARHGAP32A7KAX9 2087 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 IGHV3OR15-7A0A075B7D8 119 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 METTL15A6NJ78 407 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 TMEM210A6NLX4 147 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 CDIPTO14735 213 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 ADAM20O43506 726 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 GYPAP02724 150 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 TTRP02766 147 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 ATP6V1B1P15313 513 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 FAHP16930 419 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 EGR1P18146 543 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 MTNR1AP48039 350 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 GMFBP60983 142 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 ACTC1P68032 377 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 ACTA1P68133 377 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 RIPPLY1Q0D2K3 151 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 CEP78Q5JTW2 689 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 MEDAGQ5VYS4 303 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 PLCXD3Q63HM9 321 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 LYPD2Q6UXB3 125 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 GCSAMQ8N6F7 178 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.84□□□□□ -0.35
VARS-219ENST00000461328 HPSE2Q8WWQ2 592 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 OR5P3Q8WZ94 311 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 PPP1R14AQ96A00 147 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 RNFT2Q96EX2 444 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 JMJD8Q96S16 334 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 SLC6A7Q99884 636 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 SUCNR1Q9BXA5 334 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 RNPEPL1Q9HAU8 725 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 ERVK-18Q9QC07 812 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 ENPP5Q9UJA9 477 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 GNG8Q9UK08 70 aa12.84□□□□□ -0.35
VARS-219ENST00000461328 WNK2Q9Y3S1 2297 aa12.83□□□□□ -0.35
VARS-219ENST00000461328 P2RY10O00398 339 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 SRSF10O75494 262 aaKnown RBP12.83□□□□□ -0.36
VARS-219ENST00000461328 DHRS3O75911 302 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 FSHBP01225 129 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 FPR2P25090 351 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 GPM6AP51674 278 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 HILS1P60008 231 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 SNRPGP62308 76 aaKnown RBP12.83□□□□□ -0.36
VARS-219ENST00000461328 MICBQ29980 383 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 ODF4Q2M2E3 257 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 WDR82Q6UXN9 313 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 USP43Q70EL4 1123 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 MOB3CQ70IA8 216 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 ELMOD2Q8IZ81 293 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 ZFAND2BQ8WV99 257 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 C22orf15Q8WYQ4 148 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 RPL3LQ92901 407 aaKnown RBP12.83□□□□□ -0.36
VARS-219ENST00000461328 SLC29A1Q99808 456 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 PLEKHA1Q9HB21 404 aa12.83□□□□□ -0.36
VARS-219ENST00000461328 IGHV2-70DA0A0C4DH43 119 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 A0A1B0GVI7 797 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 DAPL1A0PJW8 107 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 ZNF732B4DXR9 585 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 TRIM77I1YAP6 450 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 NDUFA2O43678 99 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 MPZL2O60487 215 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 SULT1C4O75897 302 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 GNG3P63215 75 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 OCLNQ16625 522 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 TP53I3Q53FA7 332 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 ZNF684Q5T5D7 378 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 ZBTB37Q5TC79 503 aa12.82□□□□□ -0.36
VARS-219ENST00000461328 WDR25Q64LD2 544 aaPredicted RBP12.82□□□□□ -0.36
VARS-219ENST00000461328 FAM90A1Q86YD7 464 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms