RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 DCUN1D4Q92564 292 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 NTNG2Q96CW9 530 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 SAT2Q96F10 170 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-202ENST00000459727 PIK3IP1Q96FE7 263 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 ZNF799Q96GE5 643 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 C2orf50Q96LR7 162 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 IMMP1LQ96LU5 166 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 C1orf147Q96MC9 270 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-202ENST00000459727 LINC00052Q96N35 136 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 ZNF416Q9BWM5 594 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 HPF1Q9NWY4 346 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 MBD2Q9UBB5 411 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 ATPIF1Q9UII2 106 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 FBXO4Q9UKT5 387 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 HSF4Q9ULV5 492 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 MRPS18CQ9Y3D5 142 aaKnown RBP7.79□□□□□ -1.16
HDAC3-202ENST00000459727 EML5Q05BV3 1969 aa7.79□□□□□ -1.16
HDAC3-202ENST00000459727 NSG1A0A0A6YYJ2 146 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 LY6G6EA0A0G2JKS1 128 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 B4E171 279 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 PRSS44E7EML9 344 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 IFNA21P01568 189 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 ABOP16442 354 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 RBMXP38159 391 aaKnown RBP7.78□□□□□ -1.16
HDAC3-202ENST00000459727 TSPAN7P41732 249 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 SNU13P55769 128 aaKnown RBP7.78□□□□□ -1.16
HDAC3-202ENST00000459727 RAC3P60763 192 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 PPIAP62937 165 aaKnown RBP7.78□□□□□ -1.16
HDAC3-202ENST00000459727 MC2RQ01718 297 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 MFAP5Q13361 173 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 ENDOGQ14249 297 aaKnown RBP7.78□□□□□ -1.16
HDAC3-202ENST00000459727 TUSC1Q2TAM9 212 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 LRRC37A5PQ49AS3 106 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 SLC22A6Q4U2R8 563 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 NKAPLQ5M9Q1 402 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 PDSS1Q5T2R2 415 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 RIPPLY2Q5TAB7 128 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 PEAR1Q5VY43 1037 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-202ENST00000459727 OR52W1Q6IF63 320 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 FAM122CQ6P4D5 195 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 KCTD9Q7L273 389 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 SGPP2Q8IWX5 399 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 BAP18Q8IXM2 172 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 C20orf196Q8IYI0 205 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 SVBPQ8N300 66 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 TMEM156Q8N614 296 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 GVQW1Q8N7I0 195 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 SEMA6DQ8NFY4 1073 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 IFI44Q8TCB0 444 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 CPT1CQ8TCG5 803 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 MARCH1Q8TCQ1 289 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 MRGPRFQ96AM1 343 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 CMBLQ96DG6 245 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 NPAS1Q99742 590 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 METTL9Q9H1A3 318 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 SH2D2AQ9NP31 389 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 TMEM100Q9NV29 134 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 EHFQ9NZC4 300 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 IL36GQ9NZH8 169 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 MYEF2Q9P2K5 600 aaKnown RBP7.78□□□□□ -1.16
HDAC3-202ENST00000459727 FOXD3Q9UJU5 478 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-202ENST00000459727 PILRBQ9UKJ0 227 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 OSGIN2Q9Y236 505 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 CSAG2Q9Y5P2 127 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 POMT1Q9Y6A1 747 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 U3KQA8 63 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 DMDP11532 3685 aa7.78□□□□□ -1.16
HDAC3-202ENST00000459727 TDRD6O60522 2096 aaKnown RBP7.77□□□□□ -1.17
HDAC3-202ENST00000459727 MPDZO75970 2070 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 LOC101059948A0A1B0GTJ6 334 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 C13orf42A0A1B0GVH6 325 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 OR6C6A6NF89 314 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 WIPF3A6NGB9 483 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 POM121CA8CG34 1229 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 FOXI3A8MTJ6 420 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-202ENST00000459727 SHISA8B8ZZ34 492 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 EEF1E1-BLOC1S5C9J1V9 151 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 SOCS1O15524 211 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 FGF16O43320 207 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 IFNA2P01563 188 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 CSTBP04080 98 aaKnown RBP7.77□□□□□ -1.17
HDAC3-202ENST00000459727 P04436 131 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 CTSDP07339 412 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-202ENST00000459727 COX6A1P12074 109 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 PGAM2P15259 253 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 POU3F2P20265 443 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-202ENST00000459727 BLVRBP30043 206 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-202ENST00000459727 CDAP32320 146 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 MLF1P58340 268 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 SRPXP78539 464 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 ZNF273Q14593 569 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 OR8B8Q15620 311 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 HLA-BQ31612 363 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 PLAC9Q5JTB6 97 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 ELP2Q6IA86 826 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 C17orf107Q6ZR85 190 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 RPS19BP1Q86WX3 136 aaKnown RBP7.77□□□□□ -1.17
HDAC3-202ENST00000459727 SULF2Q8IWU5 870 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 SPAG16Q8N0X2 631 aa7.77□□□□□ -1.17
HDAC3-202ENST00000459727 ZBTB44Q8NCP5 570 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms