RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 SIGLEC9Q9Y336 463 aa3.25□□□□□ -1.89
HMGB3P30-201ENST00000457863 PRELID3BQ9Y3B1 194 aa3.25□□□□□ -1.89
HMGB3P30-201ENST00000457863 OR51B2Q9Y5P1 312 aa3.25□□□□□ -1.89
HMGB3P30-201ENST00000457863 A2MP01023 1474 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 ARAP1Q96P48 1450 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 MYH10P35580 1976 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 CHD5Q8TDI0 1954 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 IGHV2OR16-5A0A0B4J2B6 119 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 IGSF23A1L1A6 192 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 FAM159BA6NKW6 160 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 ZNF724A8MTY0 619 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 TMX2-CTNND1H3BSU7 103 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 K7EMT4 169 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 SULT2B1O00204 365 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 TNFRSF11BO00300 401 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 DUSP11O75319 330 aaKnown RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 CA11O75493 328 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 FOXH1O75593 365 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 SULT1C4O75897 302 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 CLDN1O95832 211 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 MT-CO2P00403 227 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 SERPINA7P05543 415 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 HPNP05981 417 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 IGKV2-30P06310 120 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 OR10J4P0C629 311 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 USF1P22415 310 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 HIST1H1TP22492 207 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 SLC2A5P22732 501 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 OMGP23515 440 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 ADORA2BP29275 332 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 CHRNB4P30926 498 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 CCR7P32248 378 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 OR1D4P47884 311 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 FABP6P51161 128 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 ATP4BP51164 291 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 SUB1P53999 127 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 OR12D2P58182 307 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 RND3P61587 244 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 SNRPD1P62314 119 aaKnown RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 SLC25A11Q02978 314 aaKnown RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 ZNF155Q12901 538 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 PPP1R1AQ13522 171 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 CLINT1Q14677 625 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 GINS1Q14691 196 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 SMIM21Q3B7S5 101 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 ZNF585BQ52M93 769 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 TRMT12Q53H54 448 aaKnown RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 SIRPB2Q5JXA9 342 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 TMEM205Q6UW68 189 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 GFRALQ6UXV0 394 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 C12orf54Q6X4T0 127 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 YTHDF3Q7Z739 585 aaKnown RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 CATSPER3Q86XQ3 398 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 ANGPTL5Q86XS5 388 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 SLC22A15Q8IZD6 547 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 OR1L3Q8NH93 324 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 OSR1Q8TAX0 266 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 CD200R1Q8TD46 325 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 TNFAIP8L1Q8WVP5 186 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 APOBEC4Q8WW27 367 aaKnown RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 TRUB1Q8WWH5 349 aaKnown RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 ARPC1AQ92747 370 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 RDH5Q92781 318 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 TAMM41Q96BW9 452 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 MRPL48Q96GC5 212 aaKnown RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 ALKBH3Q96Q83 286 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 ARHGDIGQ99819 225 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 C20orf144Q9BQM9 153 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 OR51J1Q9H342 316 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 CLMPQ9H6B4 373 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 NMNAT1Q9HAN9 279 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 COMMD9Q9P000 198 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 NTNG1Q9Y2I2 539 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 MRPS18CQ9Y3D5 142 aaKnown RBP3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 SETD5Q9C0A6 1442 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 WDR81Q562E7 1941 aa3.24□□□□□ -1.89
HMGB3P30-201ENST00000457863 VWA8A3KMH1 1905 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 FAM240AA0A1B0GVK7 77 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 PQLC2LA1A4F0 135 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 A6NDN8 102 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 LOC110117498-PIK3R3F6TDL0 507 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 MFNGO00587 321 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 BUB3O43684 328 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 PFDN1O60925 122 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 PIK3C2GO75747 1445 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 ATG12O94817 140 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 SOX14O95416 240 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 CLDN14O95500 239 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 HPRT1P00492 218 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 ARG1P05089 322 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 CRYGDP07320 174 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 NHLRC4P0CG21 123 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 SMIM6P0DI80 62 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 IFI30P13284 250 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 FOLR1P15328 257 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 HOXB6P17509 224 aaKnown RBP3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 TCP1P17987 556 aaKnown RBP3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 CA5AP35218 305 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 GCLMP48507 274 aa3.23□□□□□ -1.89
HMGB3P30-201ENST00000457863 RAB13P51153 203 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms