RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 GCM1Q9NP62 436 aa8.49□□□□□ -1.05
ATG4A-206ENST00000457035 DCAF16Q9NXF7 216 aa8.49□□□□□ -1.05
ATG4A-206ENST00000457035 TREM2Q9NZC2 230 aa8.49□□□□□ -1.05
ATG4A-206ENST00000457035 EXOSC1Q9Y3B2 195 aaKnown RBP8.49□□□□□ -1.05
ATG4A-206ENST00000457035 V9GYS6 101 aa8.49□□□□□ -1.05
ATG4A-206ENST00000457035 SVEP1Q4LDE5 3571 aa8.49□□□□□ -1.05
ATG4A-206ENST00000457035 IGHV3-64DA0A0J9YX35 117 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 ZNF816-ZNF321PA0A0X1KG74 233 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 FAM181BA6NEQ2 426 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 ZNF850A8MQ14 1090 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 PTGES3LE9PB15 166 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 MTRF1O75570 445 aaKnown RBP8.48□□□□□ -1.05
ATG4A-206ENST00000457035 ISG15P05161 165 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 CCDC159P0C7I6 412 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 TGM4P49221 684 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 GTF2A1P52655 376 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-206ENST00000457035 GBX2P52951 348 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-206ENST00000457035 SLC35A2P78381 396 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 LOXL1Q08397 574 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-206ENST00000457035 MRPL28Q13084 256 aaKnown RBP8.48□□□□□ -1.05
ATG4A-206ENST00000457035 MPPED2Q15777 294 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 SNCBQ16143 134 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 HFEQ30201 348 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 FAM76BQ5HYJ3 339 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 ZBTB37Q5TC79 503 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 RNLSQ5VYX0 342 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 TMEM42Q69YG0 159 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 TMPRSS11AQ6ZMR5 421 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 AHSA2Q719I0 299 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 DOK3Q7L591 496 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 C11orf53Q8IXP5 236 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 STX19Q8N4C7 294 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 KLHL36Q8N4N3 616 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 MAPK1IP1LQ8NDC0 245 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 PIGCQ92535 297 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 SGCDQ92629 289 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 ERGIC1Q969X5 290 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 C18orf12Q96KH6 178 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 COX4I2Q96KJ9 171 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 PIMREGQ9BSJ6 248 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 PAPOLGQ9BWT3 736 aaKnown RBP8.48□□□□□ -1.05
ATG4A-206ENST00000457035 RASSF4Q9H2L5 321 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 DUSP21Q9H596 190 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 PAK1IP1Q9NWT1 392 aaPredicted RBP8.48□□□□□ -1.05
ATG4A-206ENST00000457035 BABAM2Q9NXR7 383 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 UBAP1Q9NZ09 502 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 PPP1R3CQ9UQK1 317 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 PIGLQ9Y2B2 252 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 NOP16Q9Y3C1 178 aaKnown RBP8.48□□□□□ -1.05
ATG4A-206ENST00000457035 MPC1Q9Y5U8 109 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 NIPBLQ6KC79 2804 aaeCLIP8.48□□□□□ -1.05
ATG4A-206ENST00000457035 HIVEP2P31629 2446 aa8.48□□□□□ -1.05
ATG4A-206ENST00000457035 IGHV4-61A0A0C4DH41 118 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 A6NIN4 97 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 DHRS7CA6NNS2 312 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 WNT9BO14905 357 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 OGG1O15527 345 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 PPIHO43447 177 aaKnown RBP8.47□□□□□ -1.05
ATG4A-206ENST00000457035 SYT7O43581 403 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 ZFPL1O95159 310 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 LALBAP00709 142 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 CDK1P06493 297 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 INHBBP09529 407 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 FAHP16930 419 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 MYL12AP19105 171 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 USF1P22415 310 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-206ENST00000457035 CRHBPP24387 322 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 GPR6P46095 362 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-206ENST00000457035 PRDX4Q13162 271 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 MED21Q13503 144 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 ZNF181Q2M3W8 571 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 CCDC58Q4VC31 144 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 TMEM244Q5VVB8 128 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 PRAMEF6Q5VXH4 476 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 XAF1Q6GPH4 301 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 CLEC9AQ6UXN8 241 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 WDR86Q86TI4 376 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 BIVMQ86UB2 503 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 MOGAT3Q86VF5 341 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 COMMD2Q86X83 199 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 FTMTQ8N4E7 242 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 NANOGP1Q8N7R0 232 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 CCDC54Q8NEL0 328 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 OR52N1Q8NH53 320 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 ZNF420Q8TAQ5 688 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-206ENST00000457035 Q8TCH9 128 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 RPS4Y2Q8TD47 263 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 HAVCR2Q8TDQ0 301 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 GATAD2BQ8WXI9 593 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 OR5P3Q8WZ94 311 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 CNBD2Q96M20 576 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 ADAT1Q9BUB4 502 aaKnown RBP8.47□□□□□ -1.05
ATG4A-206ENST00000457035 CDCA4Q9BXL8 241 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 FGF23Q9GZV9 251 aaPredicted RBP8.47□□□□□ -1.05
ATG4A-206ENST00000457035 TMEM106BQ9NUM4 274 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 CHCHD3Q9NX63 227 aaKnown RBP8.47□□□□□ -1.05
ATG4A-206ENST00000457035 SCN3BQ9NY72 215 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 ENPP5Q9UJA9 477 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 TPRKBQ9Y3C4 175 aa8.47□□□□□ -1.05
ATG4A-206ENST00000457035 SIRT4Q9Y6E7 314 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms