RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 OR9Q2Q8NGE9 314 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 LINC00615Q96LM1 132 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 HIF1ANQ9NWT6 349 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 PISDQ9UG56 409 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SH3BGRL2Q9UJC5 107 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 AMMECR1Q9Y4X0 333 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 PCDHGA9Q9Y5G4 932 aaKnown RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A10PA6NDY2 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A18PA6NE21 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A16PA6NEW6 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A20PA6NIJ5 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A8PA6NJQ4 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A7PA6NKC0 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A22PA8MWA6 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A12PA8MX19 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A5PA8MXJ8 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A23PA8MXZ1 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A15PP0C7V4 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A13PP0C7W8 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A14PP0C7W9 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FAM90A24PP0C7X0 464 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 CTSOP43234 321 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SHEQ5VZ18 495 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 MEX3BQ6ZN04 569 aaKnown RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 LRRTM1Q86UE6 522 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 ARIH2OSQ8N7S6 290 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 OR4D6Q8NGJ1 314 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 OR5D13Q8NGL4 314 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 LIPHQ8WWY8 451 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 ST6GALNAC5Q9BVH7 336 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 ADGRL4Q9HBW9 690 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SLC2A8Q9NY64 477 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 NAV2Q8IVL1 2488 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 OR2M5A3KFT3 312 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SAP18O00422 153 aaKnown RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 GABRA4P48169 554 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 ERVFC1-1P60608 527 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 CLN3Q13286 438 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 NAGSQ8N159 534 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 BLNKQ8WV28 456 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 TOE1Q96GM8 510 aaKnown RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 CLEC5AQ9NY25 188 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 HES2Q9Y543 173 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SMPD1P17405 629 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 CALHM3Q86XJ0 350 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SELENOIQ9C0D9 397 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 OR3A1P47881 315 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FLT3LGP49771 235 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 LBX1P52954 281 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SNRPD2P62316 118 aaKnown RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 DNAJC5GQ8N7S2 189 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 WDR20Q8TBZ3 569 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 DNAJA3Q96EY1 480 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 OR1A1Q9P1Q5 309 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 CACNG5Q9UF02 275 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 TMEM88BA6NKF7 163 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 WDR1O75083 606 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FXYD4P59646 89 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 Q6ZVL8 140 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 TAS1R1Q7RTX1 841 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 AMIGO3Q86WK7 504 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 PELI1Q96FA3 418 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 MS4A8Q9BY19 250 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SMG9Q9H0W8 520 aaKnown RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SYNPO2LQ9H987 977 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 CHST2Q9Y4C5 530 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 A0A1W2PPQ1 181 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SCGB1C2P0DMR2 95 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 MRPL54Q6P161 138 aaKnown RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 OR2V2Q96R30 315 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 ADAT1Q9BUB4 502 aaKnown RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 TCRBV7S3A2A0A539 114 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 PAX5Q02548 391 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 FUT7Q11130 342 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 OLIG2Q13516 323 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 ASCL5Q7RTU5 278 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 GABRG1Q8N1C3 465 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SFXN3Q9BWM7 321 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 GPR87Q9BY21 358 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 TMED7-TICAM2A0A0A6YYA0 188 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 ZFP92A6NM28 416 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 SLC25A17O43808 307 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 PRSS23O95084 383 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 ZBTB25P24278 435 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 GPR3P46089 330 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 METAP1P53582 386 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 CIRBPQ14011 172 aaKnown RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 BSXQ3C1V8 233 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 MFSD12Q6NUT3 480 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 TGIF2LXQ8IUE1 241 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 OR52N4Q8NGI2 321 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 OR5A2Q8NGI9 324 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 ZMYND19Q96E35 227 aaPredicted RBP4.73□□□□□ -1.65
CSMD3-204ENST00000455883 PDLIM7Q9NR12 457 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 VAX2Q9UIW0 290 aa4.73□□□□□ -1.65
CSMD3-204ENST00000455883 PRF1P14222 555 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 CDHR3Q6ZTQ4 885 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 AGBL5Q8NDL9 886 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 OR2T6Q8NHC8 308 aa4.72□□□□□ -1.65
CSMD3-204ENST00000455883 KIR3DX1Q9H7L2 352 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms