RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 OR5P3Q8WZ94 311 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 C12orf43Q96C57 262 aaKnown RBP9.99□□□□□ -0.81
USP40-210ENST00000454354 OR8B4Q96RC9 309 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 CNN2Q99439 309 aaKnown RBP9.99□□□□□ -0.81
USP40-210ENST00000454354 MNTQ99583 582 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 PKP2Q99959 881 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 MICU1Q9BPX6 476 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 MROQ9BYG7 248 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 NUFIP1Q9UHK0 495 aaKnown RBP9.99□□□□□ -0.81
USP40-210ENST00000454354 COPS3Q9UNS2 423 aa9.99□□□□□ -0.81
USP40-210ENST00000454354 ZNF816-ZNF321PA0A0X1KG74 233 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 SLC22A31A6NKX4 558 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 ZNF850A8MQ14 1090 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 ZNF879B4DU55 563 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 CDIPTO14735 213 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 SRSF10O75494 262 aaKnown RBP9.98□□□□□ -0.81
USP40-210ENST00000454354 LIPFP07098 398 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 MMP9P14780 707 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 ATP6V1B1P15313 513 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 MTNR1AP48039 350 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 BPIFB3P59826 476 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 MICBQ29980 383 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 ZNF829Q3KNS6 432 aaPredicted RBP9.98□□□□□ -0.81
USP40-210ENST00000454354 MEPCEQ7L2J0 689 aaKnown RBP9.98□□□□□ -0.81
USP40-210ENST00000454354 ZDHHC23Q8IYP9 409 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 TCEANCQ8N8B7 351 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 PNLDC1Q8NA58 520 aaKnown RBP9.98□□□□□ -0.81
USP40-210ENST00000454354 GCDHQ92947 438 aaPredicted RBP9.98□□□□□ -0.81
USP40-210ENST00000454354 FGF23Q9GZV9 251 aaPredicted RBP9.98□□□□□ -0.81
USP40-210ENST00000454354 MS4A7Q9GZW8 240 aaPredicted RBP9.98□□□□□ -0.81
USP40-210ENST00000454354 PBOV1Q9GZY1 135 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 PRDM13Q9H4Q3 707 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 ADGRL4Q9HBW9 690 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 HAO2Q9NYQ3 351 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 MGAM2Q2M2H8 2515 aa9.98□□□□□ -0.81
USP40-210ENST00000454354 DSCAML1Q8TD84 2053 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 IGHV3OR15-7A0A075B7D8 119 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 TMEM269A0A1B0GVZ9 245 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 M0R129 80 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 P2RY10O00398 339 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 DVL1O14640 695 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 TMPRSS2O15393 492 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 ECDO95905 644 aaPredicted RBP9.97□□□□□ -0.81
USP40-210ENST00000454354 RNASE1P07998 156 aaKnown RBP9.97□□□□□ -0.81
USP40-210ENST00000454354 HKR1P10072 659 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 MAP2K3P46734 347 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 RIDAP52758 137 aaKnown RBP9.97□□□□□ -0.81
USP40-210ENST00000454354 BAMBIQ13145 260 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 WDR38Q5JTN6 314 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 ATPAF1Q5TC12 328 aaPredicted RBP9.97□□□□□ -0.81
USP40-210ENST00000454354 ZBTB37Q5TC79 503 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 STUMQ69YW2 141 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 ASRGL1Q7L266 308 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 BCDIN3DQ7Z5W3 292 aaKnown RBP9.97□□□□□ -0.81
USP40-210ENST00000454354 AMIGO2Q86SJ2 522 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 GID4Q8IVV7 300 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 LRTOMTQ8WZ04 291 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 PIGCQ92535 297 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 CENPNQ96H22 339 aaPredicted RBP9.97□□□□□ -0.81
USP40-210ENST00000454354 DMRTB1Q96MA1 342 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 RAB3IPQ96QF0 476 aaPredicted RBP9.97□□□□□ -0.81
USP40-210ENST00000454354 TBX15Q96SF7 602 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 CIB1Q99828 191 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 GABARAPL3Q9BY60 117 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 SIRPDQ9H106 197 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 DNTTIP1Q9H147 329 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 MOB1AQ9H8S9 216 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 CLN6Q9NWW5 311 aa9.97□□□□□ -0.81
USP40-210ENST00000454354 IGHV3OR16-10A0A075B7F0 116 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 A0A1B0GW55 424 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 PSMD9O00233 223 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 DUX4L2P0CJ85 424 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 DUX4L3P0CJ86 424 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 DUX4L4P0CJ87 422 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 DUX4L5P0CJ88 424 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 DUX4L6P0CJ89 424 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 DUX4L7P0CJ90 424 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 TGM4P49221 684 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 CXCR4P61073 352 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 ELF3P78545 371 aaPredicted RBP9.96□□□□□ -0.82
USP40-210ENST00000454354 MFGE8Q08431 387 aaPredicted RBP9.96□□□□□ -0.82
USP40-210ENST00000454354 SLC9A3R2Q15599 337 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 CEACAM21Q3KPI0 293 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 GPR157Q5UAW9 335 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 DUX4L9Q6RFH8 374 aaPredicted RBP9.96□□□□□ -0.82
USP40-210ENST00000454354 ZNF322Q6U7Q0 402 aaPredicted RBP9.96□□□□□ -0.82
USP40-210ENST00000454354 BTN2A1Q7KYR7 527 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 SLC36A1Q7Z2H8 476 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 SLC35F2Q8IXU6 374 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 FAM216BQ8N7L0 139 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 SCCPDHQ8NBX0 429 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 LY6G5BQ8NDX9 201 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 FAM81AQ8TBF8 368 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 OR51E1Q8TCB6 317 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 RPL3LQ92901 407 aaKnown RBP9.96□□□□□ -0.82
USP40-210ENST00000454354 RNF170Q96K19 258 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 PCGF1Q9BSM1 259 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 OSBPL10Q9BXB5 764 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 TTTY10Q9BZA0 68 aa9.96□□□□□ -0.82
USP40-210ENST00000454354 RASSF4Q9H2L5 321 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms