RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CD163Q86VB7 1156 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 ZNF433Q8N7K0 673 aaPredicted RBP13.91□□□□□ -0.18
SNX17-204ENST00000453453 ZNF511Q8NB15 262 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 TNFAIP8L1Q8WVP5 186 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 SLC25A21Q9BQT8 299 aaPredicted RBP13.91□□□□□ -0.18
SNX17-204ENST00000453453 NKX6-2Q9C056 277 aaPredicted RBP13.91□□□□□ -0.18
SNX17-204ENST00000453453 ASF1BQ9NVP2 202 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 FOXD3Q9UJU5 478 aaPredicted RBP13.91□□□□□ -0.18
SNX17-204ENST00000453453 SVILO95425 2214 aa13.91□□□□□ -0.18
SNX17-204ENST00000453453 LAMA5O15230 3695 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 LGALS8O00214 317 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 PRRG2O14669 202 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 ZNHIT1O43257 154 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 APOC3P02656 99 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 LAP3P28838 519 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 ALKBH1Q13686 389 aaKnown RBP13.9□□□□□ -0.18
SNX17-204ENST00000453453 PCGF3Q3KNV8 242 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 C10orf128Q5T292 105 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 C1orf185Q5T7R7 199 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 NSUN5P2Q63ZY6 315 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 PGAP1Q75T13 922 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 ZNF100Q8IYN0 542 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 OR6N2Q8NGY6 317 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 APH1AQ96BI3 265 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 LRRC46Q96FV0 321 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 SLCO5A1Q9H2Y9 848 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 SCPEP1Q9HB40 452 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 BARX1Q9HBU1 254 aaPredicted RBP13.9□□□□□ -0.18
SNX17-204ENST00000453453 EMC9Q9Y3B6 208 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 TMEM14AQ9Y6G1 99 aa13.9□□□□□ -0.18
SNX17-204ENST00000453453 GGT3PA6NGU5 568 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 BCL2L11O43521 198 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 SS18L1O75177 396 aaPredicted RBP13.9□□□□□ -0.19
SNX17-204ENST00000453453 ZNF254O75437 659 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 ZFPL1O95159 310 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 ZNF133P52736 654 aaPredicted RBP13.9□□□□□ -0.19
SNX17-204ENST00000453453 ADAM8P78325 824 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 RIPPLY2Q5TAB7 128 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.9□□□□□ -0.19
SNX17-204ENST00000453453 MUC20Q8N307 709 aaPredicted RBP13.9□□□□□ -0.19
SNX17-204ENST00000453453 OR10K1Q8NGX5 313 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 OR5AK2Q8NH90 309 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 GPR148Q8TDV2 347 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 GCDHQ92947 438 aaPredicted RBP13.9□□□□□ -0.19
SNX17-204ENST00000453453 FOXN4Q96NZ1 517 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 LINC00470Q9BZP3 86 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 WDR76Q9H967 626 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 SEC61A2Q9H9S3 476 aa13.9□□□□□ -0.19
SNX17-204ENST00000453453 IGKV1D-43A0A0B4J1Z2 117 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 A0A1B0GTI1 187 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 KANTRA0A1W2PQU2 76 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 POM121CA8CG34 1229 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 PHYHO14832 338 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 DHHO43323 396 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 RLN1P04808 185 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 ANXA2P07355 339 aaKnown RBP13.89□□□□□ -0.19
SNX17-204ENST00000453453 EDN3P14138 238 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 PSMB10P40306 273 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 CBX5P45973 191 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 SCRN3Q0VDG4 424 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 LY6DQ14210 128 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 ZMYND11Q15326 602 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 EIF2S3LQ2VIR3 472 aaKnown RBP13.89□□□□□ -0.19
SNX17-204ENST00000453453 PRR30Q53SZ7 412 aaPredicted RBP13.89□□□□□ -0.19
SNX17-204ENST00000453453 ABHD12BQ7Z5M8 362 aaPredicted RBP13.89□□□□□ -0.19
SNX17-204ENST00000453453 C12orf45Q8N5I9 185 aaPredicted RBP13.89□□□□□ -0.19
SNX17-204ENST00000453453 TMEM229BQ8NBD8 167 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 SLC26A10Q8NG04 563 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 OR52B4Q8NGK2 314 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 RNF166Q96A37 237 aaPredicted RBP13.89□□□□□ -0.19
SNX17-204ENST00000453453 RBM24Q9BX46 236 aaKnown RBP13.89□□□□□ -0.19
SNX17-204ENST00000453453 IFT22Q9H7X7 185 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 KCNG2Q9UJ96 466 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 LAMP5Q9UJQ1 280 aa13.89□□□□□ -0.19
SNX17-204ENST00000453453 ARHGAP21Q5T5U3 1957 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 MED12LQ86YW9 2145 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 TLN1Q9Y490 2541 aaKnown RBP13.88□□□□□ -0.19
SNX17-204ENST00000453453 ACACBO00763 2458 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 A0A0A6YYH2 397 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 PQLC2LA1A4F0 135 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 A6NJ64 397 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 TMEM212A6NML5 194 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 H7C2Y5 167 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 GPANK1O95872 356 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 RLN2P04090 185 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 SPARCP09486 303 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 HLA-GP17693 338 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 HCCSP53701 268 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 TAS2R19P59542 299 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 NANOS3P60323 173 aaKnown RBP13.88□□□□□ -0.19
SNX17-204ENST00000453453 GLT8D1Q68CQ7 371 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 C11orf88Q6PI97 169 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 CDC20BQ86Y33 519 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 SERPINA12Q8IW75 414 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 CPT1CQ8TCG5 803 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 COMMD4Q9H0A8 199 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 PLEKHA6Q9Y2H5 1048 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 POLR1DQ9Y2S0 133 aa13.88□□□□□ -0.19
SNX17-204ENST00000453453 DOCK7Q96N67 2140 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 TRAV14DV4A0A0A6YYC5 116 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms