RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 ISG20L2Q9H9L3 353 aaKnown RBP7.4□□□□□ -1.22
COL28A1-205ENST00000453441 PLEKHA1Q9HB21 404 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 NEK6Q9HC98 313 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 ZNF319Q9P2F9 582 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 HHLA2Q9UM44 414 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 LRRC42Q9Y546 428 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 V9GYS6 101 aa7.4□□□□□ -1.22
COL28A1-205ENST00000453441 CHD3Q12873 2000 aaKnown RBP7.4□□□□□ -1.23
COL28A1-205ENST00000453441 TEX15Q9BXT5 2789 aa7.4□□□□□ -1.23
COL28A1-205ENST00000453441 TRBV2A0A0J9YWF9 115 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 A0A1B0GTI1 187 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 LOC107986453A0A1B0GWG9 222 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 TMEM210A6NLX4 147 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 LRRC30A6NM36 301 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 OR4C45A6NMZ5 311 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 OGG1O15527 345 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 TPD52L2O43399 206 aaKnown RBP7.39□□□□□ -1.23
COL28A1-205ENST00000453441 SPRY3O43610 288 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 SSX4O60224 188 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 PTBP3O95758 552 aaKnown RBP7.39□□□□□ -1.23
COL28A1-205ENST00000453441 SERPINA3P01011 423 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 GIFP27352 417 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 C21orf33P30042 268 aaPredicted RBP7.39□□□□□ -1.23
COL28A1-205ENST00000453441 PSMB10P40306 273 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 TMEM33P57088 247 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 MVKQ03426 396 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 GPR50Q13585 617 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 IRF3Q14653 427 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 CDK5R1Q15078 307 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 TBCEQ15813 527 aaPredicted RBP7.39□□□□□ -1.23
COL28A1-205ENST00000453441 CLEC12BQ2HXU8 276 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF181Q2M3W8 571 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 HFEQ30201 348 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 ALKBH6Q3KRA9 238 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 TMEM255AQ5JRV8 349 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 CLVS2Q5SYC1 327 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 SPNS3Q6ZMD2 512 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 Q6ZR03 302 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 DNM1P46Q6ZS02 220 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 OR5AS1Q8N127 324 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 PRSS35Q8N3Z0 413 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 ZNF485Q8NCK3 441 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 BHLHE23Q8NDY6 225 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 OR8S1Q8NH09 359 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 OR5AK2Q8NH90 309 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 RPS4Y2Q8TD47 263 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 PP6455Q8WZ26 134 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 FAM168AQ92567 244 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 SMIM19Q96E16 107 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 TIMD4Q96H15 378 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 FAM71F1Q96KD3 344 aaPredicted RBP7.39□□□□□ -1.23
COL28A1-205ENST00000453441 LYZL4Q96KX0 146 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 HIST1H2AAQ96QV6 131 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 RHNO1Q9BSD3 238 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 PIMREGQ9BSJ6 248 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 RTL8AQ9BWD3 113 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 PAPOLGQ9BWT3 736 aaKnown RBP7.39□□□□□ -1.23
COL28A1-205ENST00000453441 TPK1Q9H3S4 243 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 CHODLQ9H9P2 273 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 MSL2Q9HCI7 577 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 ISYNA1Q9NPH2 558 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 LRCH1Q9Y2L9 728 aa7.39□□□□□ -1.23
COL28A1-205ENST00000453441 IGHV1-69-2A0A0G2JMI3 117 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 C5orf63A6NC05 138 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 OR5B21A6NL26 309 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 P2RY10O00398 339 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 MLNRO43193 412 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 FSTL3O95633 263 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 CD2P06729 351 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 CA6P23280 308 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 CPT2P23786 658 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 EEF1B2P24534 225 aaKnown RBP7.38□□□□□ -1.23
COL28A1-205ENST00000453441 MAGEB1P43366 347 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 KIR3DL2P43630 455 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 NANOS3P60323 173 aaKnown RBP7.38□□□□□ -1.23
COL28A1-205ENST00000453441 CCL8P80075 99 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 PRDX4Q13162 271 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 SPHARQ15513 63 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 TSTQ16762 297 aaKnown RBP7.38□□□□□ -1.23
COL28A1-205ENST00000453441 KCTD21Q4G0X4 260 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 YIF1BQ5BJH7 314 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 OR2G6Q5TZ20 316 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 TMEM42Q69YG0 159 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 DMKNQ6E0U4 476 aaPredicted RBP7.38□□□□□ -1.23
COL28A1-205ENST00000453441 PEG10Q86TG7 708 aaKnown RBP7.38□□□□□ -1.23
COL28A1-205ENST00000453441 ZDHHC23Q8IYP9 409 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 C1orf87Q8N0U7 546 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 OR5A2Q8NGI9 324 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 OR11L1Q8NGX0 322 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 OR14K1Q8NGZ2 314 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 Q8TCH9 128 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 GPR148Q8TDV2 347 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 FCGR1BQ92637 280 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 OR2V2Q96R30 315 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 CHST5Q9GZS9 411 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 CCDC90BQ9GZT6 254 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 FN3KRPQ9HA64 309 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 PAK1IP1Q9NWT1 392 aaPredicted RBP7.38□□□□□ -1.23
COL28A1-205ENST00000453441 UBAP1Q9NZ09 502 aa7.38□□□□□ -1.23
COL28A1-205ENST00000453441 ERVK-18Q9QC07 812 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms