RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 OR5P3Q8WZ94 311 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 RAB1CQ92928 201 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 FGGYQ96C11 551 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 TIMD4Q96H15 378 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 PDCD1LG2Q9BQ51 273 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 PPP1R3EQ9H7J1 279 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 FN3KRPQ9HA64 309 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 GCM1Q9NP62 436 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 TMEM106BQ9NUM4 274 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 ARFGEF3Q5TH69 2177 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 CENPEQ02224 2701 aa12.36□□□□□ -0.43
NCKIPSD-207ENST00000453349 IGHV4-30-2A0A087WSY4 118 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 LRRC30A6NM36 301 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 CLDN25C9JDP6 229 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 RP2O75695 350 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 LALBAP00709 142 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 NR4A2P43354 598 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 GATA4P43694 442 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 BDH1Q02338 343 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 ACSM1Q08AH1 577 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 IRF3Q14653 427 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 CEP78Q5JTW2 689 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 PRAMEF6Q5VXH4 476 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 PLCXD3Q63HM9 321 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 DMKNQ6E0U4 476 aaPredicted RBP12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 C1orf87Q8N0U7 546 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 ZNF420Q8TAQ5 688 aaPredicted RBP12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 PP6455Q8WZ26 134 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 HPS1Q92902 700 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 ITPKCQ96DU7 683 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 SMIM19Q96E16 107 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 REG4Q9BYZ8 158 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 GPR173Q9NS66 373 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 UFSP2Q9NUQ7 469 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 SLC7A11Q9UPY5 501 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 DHDHQ9UQ10 334 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 ZNF281Q9Y2X9 895 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 CACNG2Q9Y698 323 aa12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 SIRT4Q9Y6E7 314 aaPredicted RBP12.35□□□□□ -0.43
NCKIPSD-207ENST00000453349 ANKRD61A6NGH8 418 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 TRIM64A6NGJ6 449 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 TRIM64BA6NI03 449 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 A6NLC8 198 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 TMEM210A6NLX4 147 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 VWC2LB2RUY7 222 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 RNF223E7ERA6 249 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 PLPP2O43688 288 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 LMX1BO60663 402 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 GATBO75879 557 aaKnown RBP12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 CELP19835 753 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 GNG3P63215 75 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 MPPED2Q15777 294 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 ZNF181Q2M3W8 571 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 TMEM42Q69YG0 159 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 SERPINA12Q8IW75 414 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 SVOPQ8N4V2 548 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 ZFP41Q8N8Y5 198 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 OR1M1Q8NGA1 313 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 RPS4Y2Q8TD47 263 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 GPR148Q8TDV2 347 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 TSEN15Q8WW01 171 aaKnown RBP12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 GHSRQ92847 366 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 TECTBQ96PL2 329 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 OR5M11Q96RB7 305 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 BPESC1Q9GZL8 116 aa12.34□□□□□ -0.43
NCKIPSD-207ENST00000453349 TACC2O95359 2948 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 PNMA8CA0A1B0GUJ8 204 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 OR5B21A6NL26 309 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 ZNF732B4DXR9 585 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 PTBP3O95758 552 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 CD1AP06126 327 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 OCM2P0CE71 109 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 OCMP0CE72 109 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 CD99P14209 185 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 THBS2P35442 1172 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 GPM6AP51674 278 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 YIF1BQ5BJH7 314 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 OR51A4Q8NGJ6 313 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 OR5D14Q8NGL3 314 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 OR10AC1Q8NH08 325 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 Q8TCH9 128 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 ADAT3Q96EY9 351 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 NEK6Q9HC98 313 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 ISYNA1Q9NPH2 558 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 C1orf123Q9NWV4 160 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 RNF7Q9UBF6 113 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 LSM2Q9Y333 95 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 NPTNQ9Y639 398 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 ROS1P08922 2347 aa12.33□□□□□ -0.44
NCKIPSD-207ENST00000453349 FLNBO75369 2602 aaKnown RBP12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 hCG_1807616A0A1W2PRN6 198 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 TMEM178BH3BS89 294 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 H7C1Q1 480 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 CYB5R3P00387 301 aaPredicted RBP12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 CD2P06729 351 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 HSMCR30P0CW71 290 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 PMELP40967 661 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 MAP2K4P45985 399 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 CHN2P52757 468 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms