RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 IL34Q6ZMJ4 242 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 HDHD3Q9BSH5 251 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-204ENST00000449510 DOCK7Q96N67 2140 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 DOCK9Q9BZ29 2069 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 EFSO43281 561 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 F10P00742 488 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 CHRM2P08172 466 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 VSIG8P0DPA2 414 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 FOSL1P15407 271 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF121P58317 390 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-204ENST00000449510 HSF1Q00613 529 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 FZD5Q13467 585 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 IL10RAQ13651 578 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 LINC01590Q5TEZ4 76 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 CDC20BQ86Y33 519 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 ADAT3Q96EY9 351 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-204ENST00000449510 HSF4Q9ULV5 492 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 PIGLQ9Y2B2 252 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 PIAS3Q9Y6X2 628 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 ZDBF2Q9HCK1 2354 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 FAM24AA6NFZ4 105 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 SERPINE2P07093 398 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 BMP5P22003 454 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 ACER2Q5QJU3 275 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 TMEM268Q5VZI3 342 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 PRSS54Q6PEW0 395 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 SLC26A10Q8NG04 563 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 TMEM37Q8WXS4 190 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 CPNE4Q96A23 557 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-204ENST00000449510 HIST1H2AAQ96QV6 131 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 POLMQ9NP87 494 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-204ENST00000449510 CUTCQ9NTM9 273 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 PTPRDP23468 1912 aa11.06□□□□□ -0.64
UBE3B-204ENST00000449510 IGHV3-15A0A0B4J1V0 119 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 LOC101059948A0A1B0GTJ6 334 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 CXorf65A6NEN9 183 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 A6NIZ1 184 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 G3V3Q6 166 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 CYR61O00622 381 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 MSTNO14793 375 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 CT45A8P0DMV1 189 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 CT45A9P0DMV2 189 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 NR2C1P13056 603 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 RAP1BP61224 184 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF528Q3MIS6 628 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 CT45A2Q5DJT8 189 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 CMTM1Q8IZ96 169 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 MRPL24Q96A35 216 aaKnown RBP11.05□□□□□ -0.64
UBE3B-204ENST00000449510 RPUSD4Q96CM3 377 aaKnown RBP11.05□□□□□ -0.64
UBE3B-204ENST00000449510 RRNAD1Q96FB5 475 aaKnown RBP11.05□□□□□ -0.64
UBE3B-204ENST00000449510 FAAP24Q9BTP7 215 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 PAPOLGQ9BWT3 736 aaKnown RBP11.05□□□□□ -0.64
UBE3B-204ENST00000449510 DEFB126Q9BYW3 111 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 VN1R1Q9GZP7 353 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 TXNIPQ9H3M7 391 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 TMPRSS5Q9H3S3 457 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 C19orf12Q9NSK7 152 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 SLC17A4Q9Y2C5 497 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 NCOR1O75376 2440 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 AKAP6Q13023 2319 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 PHF3Q92576 2039 aaKnown RBP11.05□□□□□ -0.64
UBE3B-204ENST00000449510 A0A1B0GV90 55 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF587BE7ETH6 402 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 TM4SF4P48230 202 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 TMEM196Q5HYL7 178 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 DYRK2Q92630 601 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 SNX22Q96L94 193 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 ANKRD10Q9NXR5 420 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 WASF3Q9UPY6 502 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 SHANK1Q9Y566 2161 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 E9PQ18 207 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 CST4P01036 141 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 IGHG1P01857 330 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 GGNBP1Q5YKI7 109 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 UNQ9370/PRO34162Q6UXP9 181 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 H1FNTQ75WM6 255 aaPredicted RBP11.05□□□□□ -0.64
UBE3B-204ENST00000449510 DDIT4LQ96D03 193 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 ZCCHC4Q9H5U6 513 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 LIPGQ9Y5X9 500 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 SIP14410 1827 aa11.05□□□□□ -0.64
UBE3B-204ENST00000449510 SFT2D2O95562 160 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 HPNP05981 417 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 SMIM6P0DI80 62 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 KLK2P20151 261 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 IL11P20809 199 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 ZBTB25P24278 435 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 NHLH2Q02577 135 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF343Q6P1L6 599 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 OPN5Q6U736 354 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 THNSL2Q86YJ6 484 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 C8orf44Q96CB5 159 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 CABLES2Q9BTV7 478 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 GPR61Q9BZJ8 451 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 A0A087X0M5 115 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 A0A1B0GX30 115 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 OR5K4A6NMS3 321 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 J3QRE1 110 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 HSD17B6O14756 317 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 ZNF749O43361 778 aa11.04□□□□□ -0.64
UBE3B-204ENST00000449510 FBP1P09467 338 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms