RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ZNF404Q494X3 552 aa16.49■□□□□ 0.23
RPS28-202ENST00000449223 C1orf100Q5SVJ3 147 aa16.49■□□□□ 0.23
RPS28-202ENST00000449223 LINC00299Q6ZSB3 139 aa16.49■□□□□ 0.23
RPS28-202ENST00000449223 OR8G5Q8NG78 346 aa16.49■□□□□ 0.23
RPS28-202ENST00000449223 OR52N4Q8NGI2 321 aa16.49■□□□□ 0.23
RPS28-202ENST00000449223 SYNPRQ8TBG9 265 aa16.49■□□□□ 0.23
RPS28-202ENST00000449223 AP3S1Q92572 193 aa16.49■□□□□ 0.23
RPS28-202ENST00000449223 PAPOLGQ9BWT3 736 aaKnown RBP16.49■□□□□ 0.23
RPS28-202ENST00000449223 SLC22A4Q9H015 551 aa16.49■□□□□ 0.23
RPS28-202ENST00000449223 NEK6Q9HC98 313 aa16.49■□□□□ 0.23
RPS28-202ENST00000449223 RNF115Q9Y4L5 304 aa16.49■□□□□ 0.23
RPS28-202ENST00000449223 LRRK2Q5S007 2527 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 ANKRD30BLA7E2S9 258 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 LILRA1O75019 489 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 GOSR1O95249 250 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 PRKACBP22694 351 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 AZGP1P25311 298 aaKnown RBP16.48■□□□□ 0.23
RPS28-202ENST00000449223 THBS2P35442 1172 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 FABP6P51161 128 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 KLF3P57682 345 aaPredicted RBP16.48■□□□□ 0.23
RPS28-202ENST00000449223 PRDX4Q13162 271 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 RIN1Q13671 783 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 DDI2Q5TDH0 399 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 ADAM5Q6NVV9 412 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 CRIP3Q6Q6R5 217 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 MRPL24Q96A35 216 aaKnown RBP16.48■□□□□ 0.23
RPS28-202ENST00000449223 ITPKCQ96DU7 683 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 MRI1Q9BV20 369 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 MMP27Q9H306 513 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 CGGBP1Q9UFW8 167 aaPredicted RBP16.48■□□□□ 0.23
RPS28-202ENST00000449223 CMAHPQ9Y471 501 aa16.48■□□□□ 0.23
RPS28-202ENST00000449223 SMIM30A4D0T7 59 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 ZNF850A8MQ14 1090 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 SLC17A2O00624 439 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 EVX1P49640 407 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 FUT6P51993 359 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 SCAND1P57086 179 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 DAZAP2Q15038 168 aaPredicted RBP16.47■□□□□ 0.23
RPS28-202ENST00000449223 CEACAM21Q3KPI0 293 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 ALKBH6Q3KRA9 238 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 ZDHHC23Q8IYP9 409 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 BHLHE23Q8NDY6 225 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 ACOT12Q8WYK0 555 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 PIGCQ92535 297 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 CPNE2Q96FN4 548 aaPredicted RBP16.47■□□□□ 0.23
RPS28-202ENST00000449223 GPR173Q9NS66 373 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 GPR160Q9UJ42 338 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 COL12A1Q99715 3063 aa16.47■□□□□ 0.23
RPS28-202ENST00000449223 PYCARD-AS1I3L0S3 204 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 MAGEB3O15480 346 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 CLPXO76031 633 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 ZNF93P35789 620 aaPredicted RBP16.46■□□□□ 0.23
RPS28-202ENST00000449223 LHFPL2Q6ZUX7 228 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 OR5A2Q8NGI9 324 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 OR6M1Q8NGM8 313 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 HPSE2Q8WWQ2 592 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 OR5P3Q8WZ94 311 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 SORCS2Q96PQ0 1159 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 PPP1R3EQ9H7J1 279 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 ABRACLQ9P1F3 81 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 DAPK2Q9UIK4 370 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 SLC7A11Q9UPY5 501 aa16.46■□□□□ 0.23
RPS28-202ENST00000449223 NOP16Q9Y3C1 178 aaKnown RBP16.46■□□□□ 0.23
RPS28-202ENST00000449223 TIMM8AO60220 97 aaPredicted RBP16.45■□□□□ 0.22
RPS28-202ENST00000449223 RANBP1P43487 201 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 MMP15P51511 669 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 SELENOVP59797 346 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 KISS1Q15726 138 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 ADIPOQQ15848 244 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 PLCXD3Q63HM9 321 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 MCFD2Q8NI22 146 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 HS3ST6Q96QI5 342 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 MRPL37Q9BZE1 423 aaKnown RBP16.45■□□□□ 0.22
RPS28-202ENST00000449223 STEAP1Q9UHE8 339 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 ATP23Q9Y6H3 246 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 PQLC2LA1A4F0 135 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 OR5B21A6NL26 309 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 J3QKU1 62 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 HCKP08631 526 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 ALDH3B1P43353 468 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 RBP2P50120 134 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 MOGQ16653 247 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 FAM76BQ5HYJ3 339 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 MOB3CQ70IA8 216 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 LRP11Q86VZ4 500 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 SLC25A28Q96A46 364 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 BORCS8Q96FH0 119 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 SPOCK3Q9BQ16 436 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 TMEM100Q9NV29 134 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 POU2F3Q9UKI9 436 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 FZR1Q9UM11 496 aa16.45■□□□□ 0.22
RPS28-202ENST00000449223 IGKV1-27A0A075B6S5 117 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 VSTM5A8MXK1 200 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 E7EQL1 145 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 OCMP0CE72 109 aaPredicted RBP16.44■□□□□ 0.22
RPS28-202ENST00000449223 CALCBP10092 127 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 SLC2A2P11168 524 aaPredicted RBP16.44■□□□□ 0.22
RPS28-202ENST00000449223 CA6P23280 308 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 HTR2CP28335 458 aa16.44■□□□□ 0.22
RPS28-202ENST00000449223 CAPZA1P52907 286 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms