RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 C5orf63A6NC05 138 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 PRAF2O60831 178 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 HLA-HP01893 362 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 H2AFB2P0C5Z0 115 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 AKAIN1P0CW23 69 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 PSMB1P20618 241 aaKnown RBP9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 APLNRP35414 380 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 PTGFRP43088 359 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 TAS2R19P59542 299 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 HGFACQ04756 655 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 UNC119Q13432 240 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 OR8B8Q15620 311 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 UBE2V2Q15819 145 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 LHFPL2Q6ZUX7 228 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 BIVMQ86UB2 503 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 GLCCI1Q86VQ1 547 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 TMEM229BQ8NBD8 167 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 STEAP2Q8NFT2 490 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 OR56B1Q8NGI3 324 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 OR10R2Q8NGX6 335 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 OR6K3Q8NGY3 331 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 OR2AE1Q8NHA4 323 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 NKX3-1Q99801 234 aaPredicted RBP9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 SLC7A11Q9UPY5 501 aa9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 ZNF816-ZNF321PA0A0X1KG74 233 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 C5orf49A4QMS7 147 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 RAB27BO00194 218 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 CDC14BO60729 498 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 CYB5AP00167 134 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 NRASP01111 189 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 MELTFP08582 738 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 NAT2P11245 290 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 PTHLHP12272 177 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 GTF2F2P13984 249 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 ANOS1P23352 680 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 PTGER4P35408 488 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 OR3A4PP47883 348 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 RBP2P50120 134 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 FAM3AP98173 230 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 GSG1Q2KHT4 349 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 EIF2S3LQ2VIR3 472 aaKnown RBP9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 TBRG1Q3YBR2 411 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 ZNF260Q3ZCT1 412 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 TMEM42Q69YG0 159 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 OR10K2Q6IF99 312 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 VHLLQ6RSH7 139 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 TFAP2EQ6VUC0 442 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 FTMTQ8N4E7 242 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 ACBD4Q8NC06 268 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 CHST4Q8NCG5 386 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 OR5L1Q8NGL2 311 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 OR6F1Q8NGZ6 308 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 TNFAIP8L1Q8WVP5 186 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 AQP3Q92482 292 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 BCL2L2Q92843 193 aaPredicted RBP9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 SEH1LQ96EE3 360 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 BORCS8Q96FH0 119 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 SPACA5Q96QH8 159 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 PCDHB16Q9NRJ7 776 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 MCUBQ9NWR8 336 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 B3GNT2Q9NY97 397 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 MRPL15Q9P015 296 aaKnown RBP9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 KCNN3Q9UGI6 736 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 ING4Q9UNL4 249 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 ZNF292O60281 2723 aa9.17□□□□□ -0.94
VIPAS39-203ENST00000448935 TRAV6A0A075B6T7 132 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 LOC100509620A0A075B734 347 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 A0A0B4J293 547 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 C7orf66A4D0T2 115 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 GMDSO60547 372 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 ZNF780AO75290 641 aaPredicted RBP9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 PEX14O75381 377 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 CRTAPO75718 401 aaPredicted RBP9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 MPIG6BO95866 241 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 IL18BPO95998 194 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 CCNOP22674 350 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 ACKR3P25106 362 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 VEGFCP49767 419 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 CCR6P51684 374 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 FUT6P51993 359 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 ATP1B3P54709 279 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 FOXG1P55316 489 aaPredicted RBP9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 MTCP1P56278 107 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 UBE2NP61088 152 aaKnown RBP9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 RRAS2P62070 204 aaPredicted RBP9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 ZNF92Q03936 586 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 MRPL49Q13405 166 aaKnown RBP9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 GUSBP1Q15486 140 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 PNLIPRP3Q17RR3 467 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 CDNFQ49AH0 187 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 ACSF3Q4G176 576 aaPredicted RBP9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 NSUN5P2Q63ZY6 315 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 SFRP4Q6FHJ7 346 aaPredicted RBP9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 RTL6Q6ICC9 239 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 STEAP1BQ6NZ63 245 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 ZNF782Q6ZMW2 699 aaPredicted RBP9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 Q6ZT83 130 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 Q6ZTK2 550 aa9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 MRPL21Q7Z2W9 205 aaKnown RBP9.16□□□□□ -0.94
VIPAS39-203ENST00000448935 ZNF584Q8IVC4 421 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms