RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 CPT2P23786 658 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 MFGE8Q08431 387 aaPredicted RBP13.79□□□□□ -0.2
SF3A1-204ENST00000447376 ZMYND11Q15326 602 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 CR1LQ2VPA4 569 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 FAM120AOSQ5T036 256 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 PRAMEF6Q5VXH4 476 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 TMPRSS11AQ6ZMR5 421 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 NLRC3Q7RTR2 1065 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 LRRC28Q86X40 367 aaPredicted RBP13.79□□□□□ -0.2
SF3A1-204ENST00000447376 ELMOD2Q8IZ81 293 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 SYS1Q8N2H4 156 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 BPIFB6Q8NFQ5 453 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 Q8TCH9 128 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 TMEM80Q96HE8 168 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 JAM3Q9BX67 310 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 ANKRD60Q9BZ19 345 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 Q9H521 79 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 SCN3BQ9NY72 215 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 CNOT2Q9NZN8 540 aaKnown RBP13.79□□□□□ -0.2
SF3A1-204ENST00000447376 DIMT1Q9UNQ2 313 aaKnown RBP13.79□□□□□ -0.2
SF3A1-204ENST00000447376 EXOSC1Q9Y3B2 195 aaKnown RBP13.79□□□□□ -0.2
SF3A1-204ENST00000447376 PPIAL4AQ9Y536 164 aa13.79□□□□□ -0.2
SF3A1-204ENST00000447376 YLPM1P49750 1951 aaKnown RBP13.79□□□□□ -0.2
SF3A1-204ENST00000447376 A0A0G2JMP0 313 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 A0A0X1KG70 313 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 ZNF816-ZNF321PA0A0X1KG74 233 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 SRSF10O75494 262 aaKnown RBP13.78□□□□□ -0.2
SF3A1-204ENST00000447376 FOXH1O75593 365 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 CYB5R3P00387 301 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-204ENST00000447376 PNPP00491 289 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 PIPP12273 146 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-204ENST00000447376 SRD5A1P18405 259 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 SRP14P37108 136 aaKnown RBP13.78□□□□□ -0.2
SF3A1-204ENST00000447376 OR12D2P58182 307 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 SCGB2A2Q13296 93 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 ESCO2Q56NI9 601 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 SEMA6DQ8NFY4 1073 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 OR4M2Q8NGB6 313 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 OR51E1Q8TCB6 317 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 PIGCQ92535 297 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 RORBQ92753 470 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 DVL3Q92997 716 aaPredicted RBP13.78□□□□□ -0.2
SF3A1-204ENST00000447376 C4orf36Q96KX1 117 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 GPR84Q9NQS5 396 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 ACOXLQ9NUZ1 547 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 C1orf123Q9NWV4 160 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 DCAF16Q9NXF7 216 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 MIOXQ9UGB7 285 aa13.78□□□□□ -0.2
SF3A1-204ENST00000447376 FSTL3O95633 263 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 RPSAP08865 295 aaKnown RBP13.77□□□□□ -0.21
SF3A1-204ENST00000447376 HTR1AP08908 422 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 FAM157CP0CG43 387 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 RPS2P15880 293 aaKnown RBP13.77□□□□□ -0.21
SF3A1-204ENST00000447376 ANOS1P23352 680 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 GATA3P23771 443 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 GBX2P52951 348 aaPredicted RBP13.77□□□□□ -0.21
SF3A1-204ENST00000447376 RIPPLY1Q0D2K3 151 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 ST3GAL4Q11206 333 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 PRDX4Q13162 271 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 C6orf141Q5SZD1 244 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 FAHD2BQ6P2I3 314 aaPredicted RBP13.77□□□□□ -0.21
SF3A1-204ENST00000447376 KCTD8Q6ZWB6 473 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 CATSPERDQ86XM0 798 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 ZDHHC23Q8IYP9 409 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 STX19Q8N4C7 294 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 CCDC54Q8NEL0 328 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 GGHQ92820 318 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 FAHD2AQ96GK7 314 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 FAM71F1Q96KD3 344 aaPredicted RBP13.77□□□□□ -0.21
SF3A1-204ENST00000447376 ZNF184Q99676 751 aaPredicted RBP13.77□□□□□ -0.21
SF3A1-204ENST00000447376 PATZ1Q9HBE1 687 aaKnown RBP13.77□□□□□ -0.21
SF3A1-204ENST00000447376 G6PC2Q9NQR9 355 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 PSORS1C1Q9UIG5 152 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 ENPP5Q9UJA9 477 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 CAB39Q9Y376 341 aaPredicted RBP13.77□□□□□ -0.21
SF3A1-204ENST00000447376 RHBDD3Q9Y3P4 386 aa13.77□□□□□ -0.21
SF3A1-204ENST00000447376 A0A1B0GVI7 797 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 TMEM210A6NLX4 147 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 ZNF850A8MQ14 1090 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 PLPP2O43688 288 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 CST4P01036 141 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 TTRP02766 147 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 UBCP0CG48 685 aaKnown RBP13.76□□□□□ -0.21
SF3A1-204ENST00000447376 ZNF12P17014 697 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 PSMB10P40306 273 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 MPPED2Q15777 294 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 ZBTB37Q5TC79 503 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 DCAF12L2Q5VW00 463 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 FDX2Q6P4F2 183 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 DOK3Q7L591 496 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 BOLLQ8N9W6 283 aaKnown RBP13.76□□□□□ -0.21
SF3A1-204ENST00000447376 OR8B3Q8NGG8 313 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 MYDGFQ969H8 173 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 LYZL4Q96KX0 146 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 OR8B2Q96RD0 313 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 PLEKHA1Q9HB21 404 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 OR5V1Q9UGF6 321 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 LRCH1Q9Y2L9 728 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 TPRKBQ9Y3C4 175 aa13.76□□□□□ -0.21
SF3A1-204ENST00000447376 FN1P02751 2386 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms