RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 CDIPTO14735 213 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 GSC2O15499 205 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 EGR1P18146 543 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 TGM4P49221 684 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 ACTR3P61158 418 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 RPS7P62081 194 aaKnown RBP12.88□□□□□ -0.35
HMGB2-203ENST00000446922 PRDX4Q13162 271 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 APOFQ13790 326 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 DEFB112Q30KQ8 113 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 ZBTB37Q5TC79 503 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 HS3ST5Q8IZT8 346 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 LY6G5BQ8NDX9 201 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 OR5K1Q8NHB7 308 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 NPRL2Q8WTW4 380 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 ZDHHC16Q969W1 377 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 UTP4Q969X6 686 aaKnown RBP12.88□□□□□ -0.35
HMGB2-203ENST00000446922 MED30Q96HR3 178 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 HIST1H2AAQ96QV6 131 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 PCGF1Q9BSM1 259 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 SLITRK2Q9H156 845 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 HAO2Q9NYQ3 351 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 RPUSD1Q9UJJ7 312 aaKnown RBP12.88□□□□□ -0.35
HMGB2-203ENST00000446922 LRP12Q9Y561 859 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 MMP24Q9Y5R2 645 aa12.88□□□□□ -0.35
HMGB2-203ENST00000446922 IGHV3OR16-10A0A075B7F0 116 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.87□□□□□ -0.35
HMGB2-203ENST00000446922 SPRY1O43609 319 aaPredicted RBP12.87□□□□□ -0.35
HMGB2-203ENST00000446922 NDUFB3O43676 98 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 ATP5HO75947 161 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 ACKR3P25106 362 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 BNIP1Q12981 228 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 PTGES3Q15185 160 aaKnown RBP12.87□□□□□ -0.35
HMGB2-203ENST00000446922 GFOD2Q3B7J2 385 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 CDONQ4KMG0 1287 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 TMEM236Q5W0B7 351 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 METAP1DQ6UB28 335 aaPredicted RBP12.87□□□□□ -0.35
HMGB2-203ENST00000446922 C1orf122Q6ZSJ8 110 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 ZDHHC23Q8IYP9 409 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 ZNF679Q8IYX0 411 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 KIR3DL3Q8N743 410 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 OR8B12Q8NGG6 310 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 RNF170Q96K19 258 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 TBX15Q96SF7 602 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 PKP2Q99959 881 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 ZNF696Q9H7X3 374 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 SMURF1Q9HCE7 757 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 ACOXLQ9NUZ1 547 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 TVP23BQ9NYZ1 205 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 ENOPH1Q9UHY7 261 aa12.87□□□□□ -0.35
HMGB2-203ENST00000446922 IGHV1-69DA0A0B4J2H0 117 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 ZNF816-ZNF321PA0A0X1KG74 233 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 A0A1B0GVI7 797 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 TMEM269A0A1B0GVZ9 245 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 ZNF850A8MQ14 1090 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 HOXA3O43365 443 aaPredicted RBP12.86□□□□□ -0.35
HMGB2-203ENST00000446922 IGHV1-69P01742 117 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 DAPP51397 102 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 CSNK2BP67870 215 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 EFNB1P98172 346 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 HOXA4Q00056 320 aaPredicted RBP12.86□□□□□ -0.35
HMGB2-203ENST00000446922 CEACAM21Q3KPI0 293 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 LRRC10Q5BKY1 277 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 WDR38Q5JTN6 314 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 STUMQ69YW2 141 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 BRD3OSQ6XYD6 125 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 CMTM4Q8IZR5 234 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 SCCPDHQ8NBX0 429 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 BBS1Q8NFJ9 593 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 OR5A2Q8NGI9 324 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 C8orf46Q8TAG6 207 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 TBC1D15Q8TC07 691 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 ST8SIA4Q92187 359 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 PIGCQ92535 297 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 LYZL4Q96KX0 146 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 DUX5Q96PT3 197 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 CCL13Q99616 98 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 CADM1Q9BY67 442 aaKnown RBP12.86□□□□□ -0.35
HMGB2-203ENST00000446922 RASSF4Q9H2L5 321 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 FAM206AQ9NX38 181 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 H2AFY2Q9P0M6 372 aaPredicted RBP12.86□□□□□ -0.35
HMGB2-203ENST00000446922 KLHDC2Q9Y2U9 406 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 PCDHGB1Q9Y5G3 927 aa12.86□□□□□ -0.35
HMGB2-203ENST00000446922 IGHV3OR15-7A0A075B7D8 119 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 SLC22A31A6NKX4 558 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 MTRF1O75570 445 aaKnown RBP12.85□□□□□ -0.35
HMGB2-203ENST00000446922 FCN3O75636 299 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 IGLV3-1P01715 115 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 SFTPBP07988 381 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 RIDAP52758 137 aaKnown RBP12.85□□□□□ -0.35
HMGB2-203ENST00000446922 ARF6P62330 175 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 GNG3P63215 75 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 RIPPLY1Q0D2K3 151 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 ZNF829Q3KNS6 432 aaPredicted RBP12.85□□□□□ -0.35
HMGB2-203ENST00000446922 NXNL2Q5VZ03 156 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 ZNF788Q6ZQV5 615 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 MEPCEQ7L2J0 689 aaKnown RBP12.85□□□□□ -0.35
HMGB2-203ENST00000446922 ZNF671Q8TAW3 534 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 FAM81AQ8TBF8 368 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 SSMEM1Q8WWF3 244 aa12.85□□□□□ -0.35
HMGB2-203ENST00000446922 TMIGD2Q96BF3 282 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms